BLASTX nr result

ID: Dioscorea21_contig00039531 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00039531
         (319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319650.1| predicted protein [Populus trichocarpa] gi|2...   153   2e-35
ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containi...   144   6e-33
emb|CBI35164.3| unnamed protein product [Vitis vinifera]              144   6e-33
emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]   144   6e-33
ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containi...   130   9e-29

>ref|XP_002319650.1| predicted protein [Populus trichocarpa] gi|222858026|gb|EEE95573.1|
           predicted protein [Populus trichocarpa]
          Length = 705

 Score =  153 bits (386), Expect = 2e-35
 Identities = 74/106 (69%), Positives = 89/106 (83%)
 Frame = -1

Query: 319 VLLSNIYAIQNRWNDVAEVRKAMKDTRVKKTPGLSSVELNGLVHEFVMGDDSHPQIKEIK 140
           VL+SNIYA  NRWNDVA +RKA+KDT +KK PG+SS+E+NGLVH+F MGD +HP I++I 
Sbjct: 540 VLMSNIYAAANRWNDVAGMRKAVKDTGIKKEPGMSSIEVNGLVHDFKMGDTAHPLIEKIS 599

Query: 139 AMLAEMQKMLKQAGHRVDTSAVLLNIDEEEKETSLGYHSEKLALAF 2
            MLAEM K LK+AG+  DTS VL NIDEEEKET+L YHSEKLA+AF
Sbjct: 600 EMLAEMSKKLKEAGYLPDTSVVLHNIDEEEKETALNYHSEKLAMAF 645


>ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14820-like [Vitis vinifera]
          Length = 731

 Score =  144 bits (364), Expect = 6e-33
 Identities = 71/106 (66%), Positives = 84/106 (79%)
 Frame = -1

Query: 319 VLLSNIYAIQNRWNDVAEVRKAMKDTRVKKTPGLSSVELNGLVHEFVMGDDSHPQIKEIK 140
           VL+SNIYA  NRW+D A VRK MK   +KK PG S +E+NG VHEF+MGD SHPQI+ I 
Sbjct: 566 VLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRIN 625

Query: 139 AMLAEMQKMLKQAGHRVDTSAVLLNIDEEEKETSLGYHSEKLALAF 2
            MLAEM++ L +AG+  DTS VLLNIDEEEKET+L YHSEKLA+AF
Sbjct: 626 EMLAEMRRKLNEAGYVPDTSTVLLNIDEEEKETALTYHSEKLAMAF 671


>emb|CBI35164.3| unnamed protein product [Vitis vinifera]
          Length = 663

 Score =  144 bits (364), Expect = 6e-33
 Identities = 71/106 (66%), Positives = 84/106 (79%)
 Frame = -1

Query: 319 VLLSNIYAIQNRWNDVAEVRKAMKDTRVKKTPGLSSVELNGLVHEFVMGDDSHPQIKEIK 140
           VL+SNIYA  NRW+D A VRK MK   +KK PG S +E+NG VHEF+MGD SHPQI+ I 
Sbjct: 480 VLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRIN 539

Query: 139 AMLAEMQKMLKQAGHRVDTSAVLLNIDEEEKETSLGYHSEKLALAF 2
            MLAEM++ L +AG+  DTS VLLNIDEEEKET+L YHSEKLA+AF
Sbjct: 540 EMLAEMRRKLNEAGYVPDTSTVLLNIDEEEKETALTYHSEKLAMAF 585


>emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
          Length = 771

 Score =  144 bits (364), Expect = 6e-33
 Identities = 71/106 (66%), Positives = 84/106 (79%)
 Frame = -1

Query: 319 VLLSNIYAIQNRWNDVAEVRKAMKDTRVKKTPGLSSVELNGLVHEFVMGDDSHPQIKEIK 140
           VL+SNIYA  NRW+D A VRK MK   +KK PG S +E+NG VHEF+MGD SHPQI+ I 
Sbjct: 606 VLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRIN 665

Query: 139 AMLAEMQKMLKQAGHRVDTSAVLLNIDEEEKETSLGYHSEKLALAF 2
            MLAEM++ L +AG+  DTS VLLNIDEEEKET+L YHSEKLA+AF
Sbjct: 666 EMLAEMRRKLNEAGYVPDTSTVLLNIDEEEKETALTYHSEKLAMAF 711


>ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 666

 Score =  130 bits (328), Expect = 9e-29
 Identities = 65/106 (61%), Positives = 82/106 (77%)
 Frame = -1

Query: 319 VLLSNIYAIQNRWNDVAEVRKAMKDTRVKKTPGLSSVELNGLVHEFVMGDDSHPQIKEIK 140
           VLLSNIYA   R++DV+++RK MKD  +K  PG+S V+LNG VHEF MGD SHPQ+KEI 
Sbjct: 501 VLLSNIYAKVGRFDDVSKIRKLMKDRGIKTVPGVSIVDLNGTVHEFKMGDGSHPQMKEIY 560

Query: 139 AMLAEMQKMLKQAGHRVDTSAVLLNIDEEEKETSLGYHSEKLALAF 2
             L  +++ L+ AGH  DTS VL +IDEEEKET++ YHSEKLA+AF
Sbjct: 561 RKLKIIKERLQMAGHSPDTSQVLFDIDEEEKETAVNYHSEKLAIAF 606


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