BLASTX nr result

ID: Dioscorea21_contig00039486 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00039486
         (331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAJ65807.1| polyprotein [Citrus sinensis]                         160   8e-38
emb|CAC44142.1| putative polyprotein [Cicer arietinum]                149   2e-34
gb|ADB85337.1| putative retrotransposon protein [Phyllostachys e...   149   3e-34
ref|YP_173356.1| hypothetical protein NitaMp008 [Nicotiana tabac...   148   5e-34
gb|ADB85273.1| putative retrotransposon protein [Phyllostachys e...   146   2e-33

>emb|CAJ65807.1| polyprotein [Citrus sinensis]
          Length = 533

 Score =  160 bits (406), Expect = 8e-38
 Identities = 73/106 (68%), Positives = 80/106 (75%)
 Frame = +2

Query: 2   EEPHYSNYTIHPGGMKMYRGLK*HYWWNNMNWEIATFVAHCLTCQLAKAEHQRPAGHLQP 181
           EE H S Y +HPG  KMYR L+ HYWW  M  EIA FV+ CL CQ  KAEHQRPAG  QP
Sbjct: 362 EEAHCSAYAMHPGSTKMYRTLRDHYWWQGMKREIAEFVSRCLVCQQIKAEHQRPAGFSQP 421

Query: 182 LPIPEWK*EHITMDFVTGLPHTR*KHESVWVIVDQLTKSAHFLPLK 319
           LPIPEWK EHITMDFVTGLP T+  H+ VWV+VD+LTKS HFLP K
Sbjct: 422 LPIPEWKWEHITMDFVTGLPRTQSGHDGVWVVVDRLTKSTHFLPFK 467


>emb|CAC44142.1| putative polyprotein [Cicer arietinum]
          Length = 655

 Score =  149 bits (376), Expect = 2e-34
 Identities = 67/106 (63%), Positives = 83/106 (78%)
 Frame = +2

Query: 2   EEPHYSNYTIHPGGMKMYRGLK*HYWWNNMNWEIATFVAHCLTCQLAKAEHQRPAGHLQP 181
           EE H S  +IHPG  KMY+ L+ +YWW  M   +A +V+ CLTCQ AK EHQRPAG LQP
Sbjct: 331 EEAHKSKLSIHPGATKMYQDLRQNYWWPGMKKHVAEYVSTCLTCQKAKVEHQRPAGMLQP 390

Query: 182 LPIPEWK*EHITMDFVTGLPHTR*KHESVWVIVDQLTKSAHFLPLK 319
           L IPEWK + I+MDF+TGLP TR K++S+WVIVD+LTKSAHFLP++
Sbjct: 391 LDIPEWKWDSISMDFITGLPKTRRKNDSIWVIVDRLTKSAHFLPVR 436


>gb|ADB85337.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 1053

 Score =  149 bits (375), Expect = 3e-34
 Identities = 69/106 (65%), Positives = 81/106 (76%)
 Frame = +2

Query: 2   EEPHYSNYTIHPGGMKMYRGLK*HYWWNNMNWEIATFVAHCLTCQLAKAEHQRPAGHLQP 181
           +E H S Y+IHPG  KMY+ LK  YWW +M  EIA FVAHC  CQ  KAEHQRPAG LQP
Sbjct: 633 KEAHESPYSIHPGSTKMYQDLKEKYWWVSMKREIAEFVAHCDICQRVKAEHQRPAGLLQP 692

Query: 182 LPIPEWK*EHITMDFVTGLPHTR*KHESVWVIVDQLTKSAHFLPLK 319
           LPIPEWK E I MDF+TGLP T+   +S+WVI+D+LTK AHF+P+K
Sbjct: 693 LPIPEWKWEEIGMDFITGLPRTQTGCDSIWVIIDRLTKVAHFIPVK 738


>ref|YP_173356.1| hypothetical protein NitaMp008 [Nicotiana tabacum]
           gi|56806518|dbj|BAD83419.1| hypothetical protein
           (mitochondrion) [Nicotiana tabacum]
          Length = 215

 Score =  148 bits (373), Expect = 5e-34
 Identities = 63/105 (60%), Positives = 81/105 (77%)
 Frame = +2

Query: 2   EEPHYSNYTIHPGGMKMYRGLK*HYWWNNMNWEIATFVAHCLTCQLAKAEHQRPAGHLQP 181
           EE H S + +HPG  KMYR ++ HYWW  M  ++A +VA CL CQL KAEHQRPAG LQP
Sbjct: 34  EEAHSSPFFLHPGSTKMYRTIRPHYWWKGMKRDVAEYVAKCLVCQLVKAEHQRPAGPLQP 93

Query: 182 LPIPEWK*EHITMDFVTGLPHTR*KHESVWVIVDQLTKSAHFLPL 316
           + IP+WK + I MDFV+GLP T  +H+++WVI+D+LTKSAHFLP+
Sbjct: 94  VQIPQWKWDEIAMDFVSGLPKTARQHDAIWVIIDRLTKSAHFLPI 138


>gb|ADB85273.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 897

 Score =  146 bits (368), Expect = 2e-33
 Identities = 68/106 (64%), Positives = 80/106 (75%)
 Frame = +2

Query: 2   EEPHYSNYTIHPGGMKMYRGLK*HYWWNNMNWEIATFVAHCLTCQLAKAEHQRPAGHLQP 181
           +E H S+Y+IHPG  KMY+ LK  YWW  M  EIA FVAHC  CQ  KAEHQRPAG LQP
Sbjct: 466 KETHESHYSIHPGSTKMYQELKEMYWWVGMKREIAEFVAHCDVCQRVKAEHQRPAGLLQP 525

Query: 182 LPIPEWK*EHITMDFVTGLPHTR*KHESVWVIVDQLTKSAHFLPLK 319
           L IP WK E I MDF+TGLP T+  ++S+WVIVD+LTK AHF+P+K
Sbjct: 526 LSIPGWKWEQIDMDFITGLPRTQSGYDSIWVIVDRLTKVAHFIPVK 571


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