BLASTX nr result

ID: Dioscorea21_contig00039432 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00039432
         (371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAP52543.2| transposon protein, putative, CACTA, En/Spm sub-c...    64   2e-08
gb|AAX95566.1| Transposase family tnp2, putative [Oryza sativa J...    64   2e-08
ref|XP_002455856.1| hypothetical protein SORBIDRAFT_03g026295 [S...    62   6e-08
ref|XP_002451741.1| hypothetical protein SORBIDRAFT_04g006983 [S...    60   1e-07
ref|XP_002444210.1| hypothetical protein SORBIDRAFT_07g015035 [S...    60   2e-07

>gb|AAP52543.2| transposon protein, putative, CACTA, En/Spm sub-class [Oryza sativa
           Japonica Group]
          Length = 1167

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 33/94 (35%), Positives = 55/94 (58%), Gaps = 4/94 (4%)
 Frame = -3

Query: 366 FVGEKLGGHCHIQCPFIDCLNVYKQNQGQVYEHLLLRGIDTFYTTWIHHGEPSNFT---Y 196
           F+ E+ G    + CP   CLN   Q +G+V++HL + G+ T YT WIHHGEP        
Sbjct: 189 FLSERFGDDEEMLCPCRRCLNRVPQFKGRVHDHLHIHGMATTYTRWIHHGEPLKVVPHEI 248

Query: 195 GRHVDGNESDLDGNDLSYNDREE-DNGINDMLDD 97
             HVD + S  +  D++ ++ ++ D+GI+ M+++
Sbjct: 249 DDHVDEDTSLNEDFDMNVDEEDDPDDGIHGMVEE 282


>gb|AAX95566.1| Transposase family tnp2, putative [Oryza sativa Japonica Group]
          Length = 1114

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 33/94 (35%), Positives = 55/94 (58%), Gaps = 4/94 (4%)
 Frame = -3

Query: 366 FVGEKLGGHCHIQCPFIDCLNVYKQNQGQVYEHLLLRGIDTFYTTWIHHGEPSNFT---Y 196
           F+ E+ G    + CP   CLN   Q +G+V++HL + G+ T YT WIHHGEP        
Sbjct: 136 FLSERFGDDEEMLCPCRRCLNRVPQFKGRVHDHLHIHGMATTYTRWIHHGEPLKVVPHEI 195

Query: 195 GRHVDGNESDLDGNDLSYNDREE-DNGINDMLDD 97
             HVD + S  +  D++ ++ ++ D+GI+ M+++
Sbjct: 196 DDHVDEDTSLNEDFDMNVDEEDDPDDGIHGMVEE 229


>ref|XP_002455856.1| hypothetical protein SORBIDRAFT_03g026295 [Sorghum bicolor]
           gi|241927831|gb|EES00976.1| hypothetical protein
           SORBIDRAFT_03g026295 [Sorghum bicolor]
          Length = 129

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 34/90 (37%), Positives = 48/90 (53%)
 Frame = -3

Query: 366 FVGEKLGGHCHIQCPFIDCLNVYKQNQGQVYEHLLLRGIDTFYTTWIHHGEPSNFTYGRH 187
           F+ E+      I CP  +CLN    +Q  +  HLLL G+ + YT WI+HGE S+     H
Sbjct: 11  FIKERFNETEQILCPCTNCLNHKYLHQNDMERHLLLNGMSSTYTRWINHGEGSDV----H 66

Query: 186 VDGNESDLDGNDLSYNDREEDNGINDMLDD 97
           V    +  DGND S  +   D+G++ ML D
Sbjct: 67  VLEESAPEDGNDNSLEEPVHDDGLDAMLRD 96


>ref|XP_002451741.1| hypothetical protein SORBIDRAFT_04g006983 [Sorghum bicolor]
           gi|241931572|gb|EES04717.1| hypothetical protein
           SORBIDRAFT_04g006983 [Sorghum bicolor]
          Length = 165

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
 Frame = -3

Query: 366 FVGEKLGGHCHIQCPFIDCLNVYKQNQGQVYEHLLLRGIDTFYTTWIHHGEPSNFTYGRH 187
           FV E L G   I CP   CLN  K+ +G+V +H+L+ G+ T YT WIHHGE     Y   
Sbjct: 25  FVSENLSGSQEILCPCRKCLNRLKKYKGEVEDHILMYGMSTTYTRWIHHGEQLVMIYENV 84

Query: 186 VDGNESDLDGNDLSYNDREEDN----GINDMLDD 97
              NE   +G ++ + + + D     G N+  DD
Sbjct: 85  EQLNED--NGCNVEHVNEDVDYSAEFGTNEPQDD 116


>ref|XP_002444210.1| hypothetical protein SORBIDRAFT_07g015035 [Sorghum bicolor]
           gi|241940560|gb|EES13705.1| hypothetical protein
           SORBIDRAFT_07g015035 [Sorghum bicolor]
          Length = 132

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 31/105 (29%), Positives = 55/105 (52%), Gaps = 8/105 (7%)
 Frame = -3

Query: 369 KFVGEKLGGHCHIQCPFIDCLNVYKQNQGQVYEHLLLRGIDTFYTTWIHHGEPSNFTYGR 190
           KFV E+      I CP   CLN   ++Q  V +HL + G+   YT WI HGE ++     
Sbjct: 24  KFVSERYSKDSQILCPCTRCLNQKLRSQPDVSDHLHIYGMSATYTRWIEHGESADVEVVE 83

Query: 189 HVDGNESDLDGNDLSY--------NDREEDNGINDMLDDFGNFID 79
           ++D  + +++G D  +        +D +ED+G+ +M+ +  +F +
Sbjct: 84  NLD--QQEVEGRDYDFGIHVDMADDDYDEDHGVPEMIGELYSFAE 126


Top