BLASTX nr result

ID: Dioscorea21_contig00039408 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00039408
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002455173.1| hypothetical protein SORBIDRAFT_03g005520 [S...    55   5e-06

>ref|XP_002455173.1| hypothetical protein SORBIDRAFT_03g005520 [Sorghum bicolor]
           gi|241927148|gb|EES00293.1| hypothetical protein
           SORBIDRAFT_03g005520 [Sorghum bicolor]
          Length = 646

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 8/92 (8%)
 Frame = +3

Query: 3   DPQVKELFNDVDKLRVEFGSIQRPTLEIEISKDKVSVSEGTSQSQKTSHLANTTYSPMSR 182
           D +V+ LF+D+DKLR  F S++RPTL+IE+ K K  + E +  S+ T   + +++SP+  
Sbjct: 519 DAEVRTLFSDIDKLREVFESVERPTLDIEVRKAKEPMKEKSGSSRSTKDKSESSHSPVQA 578

Query: 183 -------GIESSNS-AAFVIDLQSEKELERLE 254
                   ++S  S A   + L ++ EL +LE
Sbjct: 579 PSSPKDVPVDSPKSPAKSELMLDTDSELAKLE 610


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