BLASTX nr result

ID: Dioscorea21_contig00039381 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00039381
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28186.3| unnamed protein product [Vitis vinifera]              155   3e-36
ref|XP_002281953.1| PREDICTED: pentatricopeptide repeat-containi...   155   3e-36
ref|XP_003559825.1| PREDICTED: pentatricopeptide repeat-containi...   150   1e-34
ref|XP_002323929.1| predicted protein [Populus trichocarpa] gi|2...   146   2e-33
ref|XP_004166729.1| PREDICTED: pentatricopeptide repeat-containi...   145   3e-33

>emb|CBI28186.3| unnamed protein product [Vitis vinifera]
          Length = 760

 Score =  155 bits (392), Expect = 3e-36
 Identities = 74/109 (67%), Positives = 90/109 (82%)
 Frame = +3

Query: 3   WTAIISAYAKHGRYENVMSLFEDMVKSGVQPDHITFLAVLQACGCKGMVDMGWHVFNSML 182
           WTAIISA+A+HG YE VM+LF+DM + GV+PD ITFLAV+ ACG KGMVD G+ +FNSM+
Sbjct: 522 WTAIISAHARHGDYEAVMNLFKDMEREGVKPDSITFLAVITACGRKGMVDTGYQLFNSMV 581

Query: 183 DKHMVEPWPEHYACMVDMLGRAGRLAEAEEFSKRMPKGPGVSALQSLLG 329
             H++EP PEHY+ MVDMLGRAGRL EAEEF  ++P G G+S LQSLLG
Sbjct: 582 KDHLIEPSPEHYSSMVDMLGRAGRLKEAEEFVGQIPGGAGLSVLQSLLG 630


>ref|XP_002281953.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
           mitochondrial [Vitis vinifera]
          Length = 773

 Score =  155 bits (392), Expect = 3e-36
 Identities = 74/109 (67%), Positives = 90/109 (82%)
 Frame = +3

Query: 3   WTAIISAYAKHGRYENVMSLFEDMVKSGVQPDHITFLAVLQACGCKGMVDMGWHVFNSML 182
           WTAIISA+A+HG YE VM+LF+DM + GV+PD ITFLAV+ ACG KGMVD G+ +FNSM+
Sbjct: 545 WTAIISAHARHGDYEAVMNLFKDMEREGVKPDSITFLAVITACGRKGMVDTGYQLFNSMV 604

Query: 183 DKHMVEPWPEHYACMVDMLGRAGRLAEAEEFSKRMPKGPGVSALQSLLG 329
             H++EP PEHY+ MVDMLGRAGRL EAEEF  ++P G G+S LQSLLG
Sbjct: 605 KDHLIEPSPEHYSSMVDMLGRAGRLKEAEEFVGQIPGGAGLSVLQSLLG 653


>ref|XP_003559825.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
           mitochondrial-like [Brachypodium distachyon]
          Length = 739

 Score =  150 bits (379), Expect = 1e-34
 Identities = 72/109 (66%), Positives = 85/109 (77%)
 Frame = +3

Query: 3   WTAIISAYAKHGRYENVMSLFEDMVKSGVQPDHITFLAVLQACGCKGMVDMGWHVFNSML 182
           WTAIISA+AKHG Y+ VM+LF+DMV SGV PD +  L+VL AC   G V+ G  +F+SM 
Sbjct: 513 WTAIISAHAKHGNYDTVMNLFDDMVCSGVAPDGVVLLSVLTACRHSGAVNTGREIFDSMP 572

Query: 183 DKHMVEPWPEHYACMVDMLGRAGRLAEAEEFSKRMPKGPGVSALQSLLG 329
            +H VEPWPEHYAC++DMLGRAGRL EAEE   +MP GP VSALQSLLG
Sbjct: 573 AEHHVEPWPEHYACVIDMLGRAGRLEEAEELMLQMPTGPSVSALQSLLG 621


>ref|XP_002323929.1| predicted protein [Populus trichocarpa] gi|222866931|gb|EEF04062.1|
           predicted protein [Populus trichocarpa]
          Length = 770

 Score =  146 bits (368), Expect = 2e-33
 Identities = 68/109 (62%), Positives = 85/109 (77%)
 Frame = +3

Query: 3   WTAIISAYAKHGRYENVMSLFEDMVKSGVQPDHITFLAVLQACGCKGMVDMGWHVFNSML 182
           WT IISAYA+HG YE+VM+ FE+M +  V+PD ITFL++L ACG +GMVDMG H+F SM+
Sbjct: 533 WTTIISAYARHGDYESVMNWFEEMRRLEVRPDSITFLSILTACGRRGMVDMGCHLFGSMV 592

Query: 183 DKHMVEPWPEHYACMVDMLGRAGRLAEAEEFSKRMPKGPGVSALQSLLG 329
             + +EP  EHY+C+VDMLGRAGRL EAE     +P GPG+S LQSLLG
Sbjct: 593 KDYQIEPSAEHYSCLVDMLGRAGRLEEAERLMSHIPGGPGLSVLQSLLG 641


>ref|XP_004166729.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
           mitochondrial-like [Cucumis sativus]
          Length = 781

 Score =  145 bits (367), Expect = 3e-33
 Identities = 70/109 (64%), Positives = 83/109 (76%)
 Frame = +3

Query: 3   WTAIISAYAKHGRYENVMSLFEDMVKSGVQPDHITFLAVLQACGCKGMVDMGWHVFNSML 182
           WTA+IS YA+HG YE+V+ LFE+M K  ++PD + FL+VL AC    MVDMG   FN M+
Sbjct: 540 WTALISGYAQHGDYESVIKLFEEMEKERIKPDAVIFLSVLTACSRNRMVDMGRQFFNMMI 599

Query: 183 DKHMVEPWPEHYACMVDMLGRAGRLAEAEEFSKRMPKGPGVSALQSLLG 329
             HM+EP  EHY+CMVDMLGRAGRL EAEE   R+P GPGVSALQSLLG
Sbjct: 600 KDHMIEPEGEHYSCMVDMLGRAGRLEEAEEILARIPGGPGVSALQSLLG 648


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