BLASTX nr result
ID: Dioscorea21_contig00039336
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00039336
(365 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002458507.1| hypothetical protein SORBIDRAFT_03g034905 [S... 139 2e-31
ref|XP_003567126.1| PREDICTED: pentatricopeptide repeat-containi... 136 2e-30
emb|CAN82291.1| hypothetical protein VITISV_021279 [Vitis vinifera] 136 2e-30
ref|XP_002276142.2| PREDICTED: pentatricopeptide repeat-containi... 135 3e-30
tpg|DAA57597.1| TPA: hypothetical protein ZEAMMB73_848759 [Zea m... 135 4e-30
>ref|XP_002458507.1| hypothetical protein SORBIDRAFT_03g034905 [Sorghum bicolor]
gi|241930482|gb|EES03627.1| hypothetical protein
SORBIDRAFT_03g034905 [Sorghum bicolor]
Length = 563
Score = 139 bits (351), Expect = 2e-31
Identities = 68/120 (56%), Positives = 87/120 (72%)
Frame = +1
Query: 4 LLSQIQYRDAMSWNILLTACARNEDYSEAFQIFKQMQSEGFLMDNYTAVSLLSICSKINR 183
LL + +D +SW+IL+TACARN D+ EAF FKQM+ G DNY +VSLLSIC+K N
Sbjct: 336 LLVHKRDQDTISWSILITACARNGDFVEAFGFFKQMRIFGHRFDNYVSVSLLSICTKNNS 395
Query: 184 LDLGSALHAFIIKVNSGYDEVFVNNVLLDMYTKCGSLDCALRVFEEMDGRNLISWTALIS 363
L LG +H I+K NS + +V+N+LLDMY KCG ++ LRVFEEM+ RNLISWT +IS
Sbjct: 396 LYLGKLIHGLIVKTNSNCSDSYVDNMLLDMYAKCGRIEDCLRVFEEMEDRNLISWTTVIS 455
>ref|XP_003567126.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g58590-like [Brachypodium distachyon]
Length = 680
Score = 136 bits (342), Expect = 2e-30
Identities = 66/121 (54%), Positives = 86/121 (71%)
Frame = +1
Query: 1 QLLSQIQYRDAMSWNILLTACARNEDYSEAFQIFKQMQSEGFLMDNYTAVSLLSICSKIN 180
+LL Q D +S +I +TACARN DYSEAF+ F+QM+ G DNY VSLLSIC K+N
Sbjct: 424 ELLLHQQSSDNISCSIFITACARNGDYSEAFEYFRQMRILGHHFDNYVTVSLLSICIKVN 483
Query: 181 RLDLGSALHAFIIKVNSGYDEVFVNNVLLDMYTKCGSLDCALRVFEEMDGRNLISWTALI 360
L LG +H IIK +SG + +V+N+LLDMY KCG ++ +R FEEM+ RN+ISWT +I
Sbjct: 484 SLILGRLVHGLIIKTSSGCSDTYVHNMLLDMYAKCGRIEDCVRAFEEMENRNIISWTTVI 543
Query: 361 S 363
S
Sbjct: 544 S 544
Score = 85.1 bits (209), Expect = 5e-15
Identities = 47/121 (38%), Positives = 68/121 (56%)
Frame = +1
Query: 1 QLLSQIQYRDAMSWNILLTACARNEDYSEAFQIFKQMQSEGFLMDNYTAVSLLSICSKIN 180
+L + + + D +SWN ++TA AR+ F++F MQ +G L D T S+L+ C+ IN
Sbjct: 195 KLFNWLMFTDVVSWNTMITAFARSNLPGRTFELFLMMQGQGVLPDETTFSSVLNACTNIN 254
Query: 181 RLDLGSALHAFIIKVNSGYDEVFVNNVLLDMYTKCGSLDCALRVFEEMDGRNLISWTALI 360
+ G +HA IK N VFVN L+D YTKC A +V EE+ ++ W ALI
Sbjct: 255 GHEHGKYVHAKSIKHNLN-TRVFVNTSLVDFYTKCVGSKDARKVLEEISDKSASCWNALI 313
Query: 361 S 363
S
Sbjct: 314 S 314
>emb|CAN82291.1| hypothetical protein VITISV_021279 [Vitis vinifera]
Length = 954
Score = 136 bits (342), Expect = 2e-30
Identities = 63/120 (52%), Positives = 87/120 (72%)
Frame = +1
Query: 4 LLSQIQYRDAMSWNILLTACARNEDYSEAFQIFKQMQSEGFLMDNYTAVSLLSICSKINR 183
L S ++ D +SWNIL+ ACARN DY E F++FK MQ DNYT VSLLS+C+K+
Sbjct: 539 LFSLLEEPDIVSWNILIAACARNGDYKEVFELFKHMQMAQIYPDNYTVVSLLSVCTKLCN 598
Query: 184 LDLGSALHAFIIKVNSGYDEVFVNNVLLDMYTKCGSLDCALRVFEEMDGRNLISWTALIS 363
L LGS++H FIIK + + + FV NVL+DMY KCG ++ +L++F ++ RN+I+WTALIS
Sbjct: 599 LALGSSIHGFIIKTDFKFCDTFVFNVLIDMYGKCGCIESSLKIFNKIIXRNIITWTALIS 658
Score = 83.6 bits (205), Expect = 2e-14
Identities = 41/112 (36%), Positives = 69/112 (61%)
Frame = +1
Query: 25 RDAMSWNILLTACARNEDYSEAFQIFKQMQSEGFLMDNYTAVSLLSICSKINRLDLGSAL 204
RD +SWN ++ A A++E S+ ++F +M +G L + T VS+++ C+ + L G +
Sbjct: 318 RDVVSWNTMIGALAKSERPSKVLELFLKMSLDGVLPNETTFVSVINSCTNLQILVFGEYI 377
Query: 205 HAFIIKVNSGYDEVFVNNVLLDMYTKCGSLDCALRVFEEMDGRNLISWTALI 360
HA +I+ N VFV + L+D Y KC +L+ A F+E+D +N++ W ALI
Sbjct: 378 HAKVIR-NKIESNVFVGSALVDFYAKCDNLESAHCCFDEIDEKNVVCWNALI 428
Score = 62.0 bits (149), Expect = 5e-08
Identities = 33/121 (27%), Positives = 64/121 (52%)
Frame = +1
Query: 1 QLLSQIQYRDAMSWNILLTACARNEDYSEAFQIFKQMQSEGFLMDNYTAVSLLSICSKIN 180
++ ++ R+ +S+N ++ +RN EA+ +F +++ GF +T LLS S
Sbjct: 109 EVFGEMTQRNVVSYNTIIGGYSRNGSVEEAWNLFSELRRYGFEPTQHTFAGLLSCASL-- 166
Query: 181 RLDLGSALHAFIIKVNSGYDEVFVNNVLLDMYTKCGSLDCALRVFEEMDGRNLISWTALI 360
+L G L A ++K + + + LL ++ + G +D + FEEM +NL++W +I
Sbjct: 167 KLSQGFQLQAQMVKSGLFHADPYAGTALLSLFRRNGCIDEVVCAFEEMPLKNLVTWNTVI 226
Query: 361 S 363
S
Sbjct: 227 S 227
Score = 54.3 bits (129), Expect = 1e-05
Identities = 31/117 (26%), Positives = 64/117 (54%), Gaps = 1/117 (0%)
Frame = +1
Query: 13 QIQYRDAMSWNILLTACARNEDYSEAFQIFKQMQSEGFLMDNYTAVSLLSICSKINRLDL 192
++ ++ ++WN +++ E+ +F+++ G + + + +LS + L+L
Sbjct: 213 EMPLKNLVTWNTVISLFGNYGFSEESMFLFRELMRTGAGLSECSFMGVLSGFASEQDLEL 272
Query: 193 GSALHAFIIKVNSGYD-EVFVNNVLLDMYTKCGSLDCALRVFEEMDGRNLISWTALI 360
G +H +IK +G+D EV V N L++MY KC + A ++FE R+++SW +I
Sbjct: 273 GEQVHDLLIK--NGFDXEVSVLNSLINMYVKCSCIXLAEKMFELGCVRDVVSWNTMI 327
>ref|XP_002276142.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g58590-like [Vitis vinifera]
Length = 921
Score = 135 bits (341), Expect = 3e-30
Identities = 63/120 (52%), Positives = 87/120 (72%)
Frame = +1
Query: 4 LLSQIQYRDAMSWNILLTACARNEDYSEAFQIFKQMQSEGFLMDNYTAVSLLSICSKINR 183
L S ++ D +SWNIL+ ACARN DY E F++FK MQ DNYT VSLLS+C+K+
Sbjct: 539 LFSLLEEPDIVSWNILIAACARNGDYKEVFELFKHMQMAQIYPDNYTVVSLLSVCTKLCN 598
Query: 184 LDLGSALHAFIIKVNSGYDEVFVNNVLLDMYTKCGSLDCALRVFEEMDGRNLISWTALIS 363
L LGS++H FIIK + + + FV NVL+DMY KCG ++ +L++F ++ RN+I+WTALIS
Sbjct: 599 LALGSSIHGFIIKTDFKFCDTFVFNVLIDMYGKCGCIESSLKIFNKIIERNIITWTALIS 658
Score = 83.6 bits (205), Expect = 2e-14
Identities = 41/112 (36%), Positives = 69/112 (61%)
Frame = +1
Query: 25 RDAMSWNILLTACARNEDYSEAFQIFKQMQSEGFLMDNYTAVSLLSICSKINRLDLGSAL 204
RD +SWN ++ A A++E S+ ++F +M +G L + T VS+++ C+ + L G +
Sbjct: 318 RDVVSWNTMIGALAKSERPSKVLELFLKMSLDGVLPNETTFVSVINSCTNLQILVFGEYI 377
Query: 205 HAFIIKVNSGYDEVFVNNVLLDMYTKCGSLDCALRVFEEMDGRNLISWTALI 360
HA +I+ N VFV + L+D Y KC +L+ A F+E+D +N++ W ALI
Sbjct: 378 HAKVIR-NKIESNVFVGSALVDFYAKCDNLESAHCCFDEIDEKNVVCWNALI 428
Score = 63.2 bits (152), Expect = 2e-08
Identities = 34/121 (28%), Positives = 64/121 (52%)
Frame = +1
Query: 1 QLLSQIQYRDAMSWNILLTACARNEDYSEAFQIFKQMQSEGFLMDNYTAVSLLSICSKIN 180
++ ++ R+ +S+N ++ +RN EA+ +F +M+ GF +T LLS S
Sbjct: 109 KVFGEMTQRNVVSYNTIIGGYSRNGSVEEAWNLFSEMRRYGFEPTQHTFAGLLSCASL-- 166
Query: 181 RLDLGSALHAFIIKVNSGYDEVFVNNVLLDMYTKCGSLDCALRVFEEMDGRNLISWTALI 360
+L G L A ++K + + + LL ++ + G +D + FEEM +NL++W +I
Sbjct: 167 KLSQGFQLQAQMVKSGLFHADPYAGTALLSLFGRNGCIDEVVCAFEEMPQKNLVTWNTVI 226
Query: 361 S 363
S
Sbjct: 227 S 227
>tpg|DAA57597.1| TPA: hypothetical protein ZEAMMB73_848759 [Zea mays]
Length = 664
Score = 135 bits (339), Expect = 4e-30
Identities = 66/120 (55%), Positives = 84/120 (70%)
Frame = +1
Query: 4 LLSQIQYRDAMSWNILLTACARNEDYSEAFQIFKQMQSEGFLMDNYTAVSLLSICSKINR 183
LL + RD +SW+IL+TACARN D+ EAF F+QM+ G D+Y VSLL IC+K N
Sbjct: 423 LLLHKRDRDTISWSILITACARNGDFIEAFGFFRQMRIFGHRFDSYVCVSLLGICTKNNS 482
Query: 184 LDLGSALHAFIIKVNSGYDEVFVNNVLLDMYTKCGSLDCALRVFEEMDGRNLISWTALIS 363
L LG +H IK NS + +V+N+LLDMY KCG ++ LRVFEEM+ RNLISWT +IS
Sbjct: 483 LYLGKLIHGLFIKTNSSCSDSYVDNMLLDMYAKCGRIEDCLRVFEEMEDRNLISWTTVIS 542
Score = 71.2 bits (173), Expect = 8e-11
Identities = 43/121 (35%), Positives = 63/121 (52%)
Frame = +1
Query: 1 QLLSQIQYRDAMSWNILLTACARNEDYSEAFQIFKQMQSEGFLMDNYTAVSLLSICSKIN 180
+L ++I +RD + WN ++T AR+ AF++F MQ +G + T S+L C+ I+
Sbjct: 195 KLFNEIMFRDVVCWNTMITGFARSHVPERAFELFLSMQRQGIFPNEITFASVLYACTVID 254
Query: 181 RLDLGSALHAFIIKVNSGYDEVFVNNVLLDMYTKCGSLDCALRVFEEMDGRNLISWTALI 360
G +HA IIK N V VN L+ Y C D A +V E + G + W ALI
Sbjct: 255 GHKHGRFVHAKIIKHNLS-TSVSVNTSLVGFYANCSRGD-AHKVLEGVHGNSTTCWNALI 312
Query: 361 S 363
S
Sbjct: 313 S 313