BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00039297
         (240 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT58770.1| putative polyprotein [Oryza sativa Japonica Group]     120   1e-25
emb|CCI55315.1| PH01B001I13.11 [Phyllostachys edulis]                 114   8e-24
ref|NP_001062653.2| Os09g0244000 [Oryza sativa Japonica Group] g...   109   2e-22
gb|ABB47665.1| retrotransposon protein, putative, unclassified, ...   109   3e-22
gb|ABV72583.1| unknown [Oryza sativa Japonica Group]                  109   3e-22

>gb|AAT58770.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1419

 Score =  120 bits (301), Expect = 1e-25
 Identities = 58/79 (73%), Positives = 64/79 (81%)
 Frame = +3

Query: 3    ALFVHSSSRGRTLLLLYVDDMIITGDDPAHVEFVKHHLQQHFQMTDLGRLSYFLGIEVTS 182
            ALF+H+SSRGRT+LLLYVDDMIITGDD +HV FVK  L + F MTDLG L YFLGIEV S
Sbjct: 1087 ALFIHTSSRGRTILLLYVDDMIITGDDASHVAFVKQRLSEQFMMTDLGPLKYFLGIEVAS 1146

Query: 183  TPTGFQLSQQRYTSDILVR 239
            TP GF LSQ RYT D+L R
Sbjct: 1147 TPNGFHLSQHRYTLDLLSR 1165


>emb|CCI55315.1| PH01B001I13.11 [Phyllostachys edulis]
          Length = 1385

 Score =  114 bits (285), Expect = 8e-24
 Identities = 55/77 (71%), Positives = 64/77 (83%)
 Frame = +3

Query: 3    ALFVHSSSRGRTLLLLYVDDMIITGDDPAHVEFVKHHLQQHFQMTDLGRLSYFLGIEVTS 182
            ALFVH+SSRGRTLLLLYVDDMIITGDD  ++ FVK HL + F M+DLG L YFLGIEVTS
Sbjct: 1055 ALFVHTSSRGRTLLLLYVDDMIITGDDSEYIAFVKAHLSEQFLMSDLGPLRYFLGIEVTS 1114

Query: 183  TPTGFQLSQQRYTSDIL 233
            TP GF +SQ++Y  D+L
Sbjct: 1115 TPDGFFMSQEKYIQDLL 1131


>ref|NP_001062653.2| Os09g0244000 [Oryza sativa Japonica Group]
            gi|255678704|dbj|BAF24567.2| Os09g0244000 [Oryza sativa
            Japonica Group]
          Length = 1149

 Score =  109 bits (273), Expect = 2e-22
 Identities = 52/79 (65%), Positives = 61/79 (77%)
 Frame = +3

Query: 3    ALFVHSSSRGRTLLLLYVDDMIITGDDPAHVEFVKHHLQQHFQMTDLGRLSYFLGIEVTS 182
            ALF+H S RGRTLLLLYVDDM+ITGDD  H+  VK HL + FQMTDLG LSYFLGIEV  
Sbjct: 818  ALFIHLSPRGRTLLLLYVDDMLITGDDVDHISHVKRHLNEQFQMTDLGPLSYFLGIEVLH 877

Query: 183  TPTGFQLSQQRYTSDILVR 239
            +  G+ LSQ +Y  D++VR
Sbjct: 878  SAKGYYLSQSKYIQDLIVR 896


>gb|ABB47665.1| retrotransposon protein, putative, unclassified, expressed [Oryza
            sativa Japonica Group] gi|78708691|gb|ABB47666.1|
            retrotransposon protein, putative, unclassified,
            expressed [Oryza sativa Japonica Group]
          Length = 1682

 Score =  109 bits (272), Expect = 3e-22
 Identities = 53/79 (67%), Positives = 63/79 (79%)
 Frame = +3

Query: 3    ALFVHSSSRGRTLLLLYVDDMIITGDDPAHVEFVKHHLQQHFQMTDLGRLSYFLGIEVTS 182
            ALF+H+SSRGRTLLLLYVDDM+ITGDD  ++ FVK  L + F M+DLG LSYFLGIEVTS
Sbjct: 934  ALFIHTSSRGRTLLLLYVDDMLITGDDLEYIAFVKGKLSEQFMMSDLGPLSYFLGIEVTS 993

Query: 183  TPTGFQLSQQRYTSDILVR 239
            T  G+ LSQ RY  D+L +
Sbjct: 994  TVDGYYLSQHRYIEDLLAQ 1012


>gb|ABV72583.1| unknown [Oryza sativa Japonica Group]
          Length = 392

 Score =  109 bits (272), Expect = 3e-22
 Identities = 53/79 (67%), Positives = 63/79 (79%)
 Frame = +3

Query: 3   ALFVHSSSRGRTLLLLYVDDMIITGDDPAHVEFVKHHLQQHFQMTDLGRLSYFLGIEVTS 182
           ALF+H+SSRGRTLLLLYVDDM+ITGDD  ++ FVK  L + F M+DLG LSYFLGIEVTS
Sbjct: 197 ALFIHTSSRGRTLLLLYVDDMLITGDDLEYIAFVKGKLSEQFMMSDLGPLSYFLGIEVTS 256

Query: 183 TPTGFQLSQQRYTSDILVR 239
           T  G+ LSQ RY  D+L +
Sbjct: 257 TVDGYYLSQHRYIEDLLAQ 275