BLASTX nr result

ID: Dioscorea21_contig00039271 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00039271
         (274 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAC77634.1| 24K germin like protein [Nicotiana tabacum]            60   2e-07
gb|ADW66138.1| auxin-binding protein [Solanum nigrum]                  59   5e-07
gb|ABV03161.1| germin-like protein [Chimonanthus praecox]              58   7e-07
gb|ABC86741.1| auxin-binding protein [Vitis pseudoreticulata]          57   2e-06
ref|XP_002516286.1| Auxin-binding protein ABP19a precursor, puta...    57   2e-06

>dbj|BAC77634.1| 24K germin like protein [Nicotiana tabacum]
          Length = 210

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 26/53 (49%), Positives = 37/53 (69%)
 Frame = +2

Query: 116 AADQDFCVGDINAPEGPAGYSCKKASLVTSNDFLSKDIFKPNQIFPTIELKLT 274
           AA  DFCVGD++ P+GP GY+CKK S VT+NDF+   +  P ++ P I+  +T
Sbjct: 18  AAVLDFCVGDLSVPDGPGGYACKKPSAVTANDFVFSGLATPVKLNPLIKAAVT 70


>gb|ADW66138.1| auxin-binding protein [Solanum nigrum]
          Length = 96

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 26/53 (49%), Positives = 37/53 (69%)
 Frame = +2

Query: 116 AADQDFCVGDINAPEGPAGYSCKKASLVTSNDFLSKDIFKPNQIFPTIELKLT 274
           AA  DFCVGD++ P+GP GYSCKK S VT++DF+   +  P ++ P I+  +T
Sbjct: 6   AAVLDFCVGDLSLPDGPCGYSCKKPSKVTADDFVFSGLATPVKLNPLIKAAVT 58


>gb|ABV03161.1| germin-like protein [Chimonanthus praecox]
          Length = 214

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 27/53 (50%), Positives = 34/53 (64%)
 Frame = +2

Query: 116 AADQDFCVGDINAPEGPAGYSCKKASLVTSNDFLSKDIFKPNQIFPTIELKLT 274
           AA QDFCVGD+  PEGPAGYSCKK ++VT +DF+   + K       I   +T
Sbjct: 22  AAVQDFCVGDLTGPEGPAGYSCKKPAIVTVDDFVFSGLGKAGNTSNIIRAAVT 74


>gb|ABC86741.1| auxin-binding protein [Vitis pseudoreticulata]
          Length = 137

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 25/34 (73%), Positives = 29/34 (85%)
 Frame = +2

Query: 116 AADQDFCVGDINAPEGPAGYSCKKASLVTSNDFL 217
           AA QDFCVGD+ APEGPAGYSCKK + VT +DF+
Sbjct: 17  AAVQDFCVGDLAAPEGPAGYSCKKPAKVTVDDFV 50


>ref|XP_002516286.1| Auxin-binding protein ABP19a precursor, putative [Ricinus communis]
           gi|223544772|gb|EEF46288.1| Auxin-binding protein ABP19a
           precursor, putative [Ricinus communis]
          Length = 208

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 25/50 (50%), Positives = 34/50 (68%)
 Frame = +2

Query: 125 QDFCVGDINAPEGPAGYSCKKASLVTSNDFLSKDIFKPNQIFPTIELKLT 274
           QD+CVGD++ P+GPAGY CKK   VT NDF+   +  P +I P I+  +T
Sbjct: 21  QDYCVGDLSGPDGPAGYGCKKT--VTVNDFVYSGLAAPGKILPLIKAGVT 68


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