BLASTX nr result

ID: Dioscorea21_contig00039255 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00039255
         (318 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532993.1| PREDICTED: ATP-dependent DNA helicase Q-like...   120   9e-26
ref|XP_002303149.1| predicted protein [Populus trichocarpa] gi|2...   119   3e-25
ref|XP_004146283.1| PREDICTED: ATP-dependent DNA helicase Q-like...   117   1e-24
ref|XP_002530679.1| DNA helicase hus2, putative [Ricinus communi...   116   2e-24
ref|XP_003581242.1| PREDICTED: ATP-dependent DNA helicase Q-like...   114   6e-24

>ref|XP_003532993.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like [Glycine max]
          Length = 1160

 Score =  120 bits (302), Expect = 9e-26
 Identities = 57/101 (56%), Positives = 73/101 (72%)
 Frame = -3

Query: 307 RGNFMGPRENIMPTELCEICSHGLKLAFCPEARGHLQELKDKLIAISNELLDNAGDLSPS 128
           + NF    +N++P ELC  C HG KL FCPEA  HLQE+KD LIAISNELLDN  +L+ +
Sbjct: 208 KDNFARQGDNVLPPELCLDCIHGYKLGFCPEAASHLQEMKDNLIAISNELLDNGENLNST 267

Query: 127 RCESLRQDRLHLNKQVQQLEQYLNNSRVNEEREMSHRMAST 5
           +   LR DR  LNKQ+QQLE+Y+++  +NEER+ SH  AST
Sbjct: 268 QIAKLRHDRSQLNKQIQQLEKYIHSGNLNEERQKSHFSAST 308


>ref|XP_002303149.1| predicted protein [Populus trichocarpa] gi|222840581|gb|EEE78128.1|
           predicted protein [Populus trichocarpa]
          Length = 1194

 Score =  119 bits (297), Expect = 3e-25
 Identities = 59/101 (58%), Positives = 74/101 (73%)
 Frame = -3

Query: 307 RGNFMGPRENIMPTELCEICSHGLKLAFCPEARGHLQELKDKLIAISNELLDNAGDLSPS 128
           + +F+ P E  +P ELC  CSHG KL  CPEA  HLQE+KD LIA+SN+LLDNA +LS +
Sbjct: 258 QNSFIRPEEISVPPELCSNCSHGFKLGLCPEAAKHLQEMKDMLIAVSNDLLDNAAELSQA 317

Query: 127 RCESLRQDRLHLNKQVQQLEQYLNNSRVNEEREMSHRMAST 5
           + + LRQDRL LNKQ+QQLE+YL     +EER+ SH  AST
Sbjct: 318 QIDKLRQDRLQLNKQIQQLEKYLR----DEERQKSHFSAST 354


>ref|XP_004146283.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like, partial
           [Cucumis sativus] gi|449511185|ref|XP_004163888.1|
           PREDICTED: ATP-dependent DNA helicase Q-like 4A-like,
           partial [Cucumis sativus]
          Length = 1269

 Score =  117 bits (292), Expect = 1e-24
 Identities = 55/101 (54%), Positives = 72/101 (71%)
 Frame = -3

Query: 307 RGNFMGPRENIMPTELCEICSHGLKLAFCPEARGHLQELKDKLIAISNELLDNAGDLSPS 128
           + N     E+  P ELC  CSHG K+  CPEA  HLQELKD+LI+ISN+LLDN  +LSP 
Sbjct: 313 KDNVARQEESNYPDELCTNCSHGFKIELCPEASSHLQELKDRLISISNDLLDNVNNLSPV 372

Query: 127 RCESLRQDRLHLNKQVQQLEQYLNNSRVNEEREMSHRMAST 5
           + + LRQ+R+HLNKQ+Q LE++++   VNEER  SH  A+T
Sbjct: 373 QIDKLRQERVHLNKQIQLLERHISLDAVNEERRRSHLFATT 413


>ref|XP_002530679.1| DNA helicase hus2, putative [Ricinus communis]
           gi|223529772|gb|EEF31710.1| DNA helicase hus2, putative
           [Ricinus communis]
          Length = 1233

 Score =  116 bits (291), Expect = 2e-24
 Identities = 59/99 (59%), Positives = 71/99 (71%)
 Frame = -3

Query: 301 NFMGPRENIMPTELCEICSHGLKLAFCPEARGHLQELKDKLIAISNELLDNAGDLSPSRC 122
           NF    E  +PTELC+ C+HG KL  CPEA  HLQE+KD LIA+SNELLDN+ +LS  + 
Sbjct: 261 NFARSDEMFLPTELCQNCNHGFKLGLCPEAGNHLQEMKDMLIAVSNELLDNSTNLSSVQI 320

Query: 121 ESLRQDRLHLNKQVQQLEQYLNNSRVNEEREMSHRMAST 5
           E LRQDRL LNKQ+QQLE YL     ++ER+ SH  AST
Sbjct: 321 EKLRQDRLQLNKQIQQLESYLR----DKERQKSHFSAST 355


>ref|XP_003581242.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like [Brachypodium
           distachyon]
          Length = 1126

 Score =  114 bits (286), Expect = 6e-24
 Identities = 53/104 (50%), Positives = 75/104 (72%)
 Frame = -3

Query: 313 GSRGNFMGPRENIMPTELCEICSHGLKLAFCPEARGHLQELKDKLIAISNELLDNAGDLS 134
           G++ N  G  EN +P EL EIC HG KLAFCPEA+ H+QE+KD+++AI +EL+D +G+LS
Sbjct: 208 GNKCNLTGLDENSLPQELSEICIHGCKLAFCPEAKYHVQEMKDQMLAICSELIDGSGELS 267

Query: 133 PSRCESLRQDRLHLNKQVQQLEQYLNNSRVNEEREMSHRMASTT 2
           P   E+LR+ R HL KQ + LE Y+  S  ++ER+ SH MA+ +
Sbjct: 268 PQDSEALRKQRAHLKKQTKLLEDYMARSTQDDERQRSHSMATAS 311


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