BLASTX nr result

ID: Dioscorea21_contig00039253 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00039253
         (329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510963.1| Structural maintenance of chromosome, putati...   109   9e-41
ref|XP_002326795.1| condensin complex components subunit [Populu...   109   2e-40
ref|XP_002269854.1| PREDICTED: structural maintenance of chromos...   108   2e-40
ref|XP_002864790.1| hypothetical protein ARALYDRAFT_496418 [Arab...   108   2e-40
emb|CBI24628.3| unnamed protein product [Vitis vinifera]              108   2e-40

>ref|XP_002510963.1| Structural maintenance of chromosome, putative [Ricinus communis]
            gi|223550078|gb|EEF51565.1| Structural maintenance of
            chromosome, putative [Ricinus communis]
          Length = 1176

 Score =  109 bits (273), Expect(2) = 9e-41
 Identities = 55/68 (80%), Positives = 55/68 (80%)
 Frame = +3

Query: 126  VAFGSVWKQSLSELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVDAALDLSHTQNIGRMI 305
            VAFGSVWKQSLSELSGGQR             FKPAPLYILDEVDAALDLSHTQNIGRMI
Sbjct: 1070 VAFGSVWKQSLSELSGGQRSLLALSLILALLLFKPAPLYILDEVDAALDLSHTQNIGRMI 1129

Query: 306  KAHFPHSQ 329
            KAHFPHSQ
Sbjct: 1130 KAHFPHSQ 1137



 Score = 82.4 bits (202), Expect(2) = 9e-41
 Identities = 39/41 (95%), Positives = 39/41 (95%)
 Frame = +1

Query: 1    LKVTWVKVNKDFGSIFSTLLPGTMAKLEPPEGSSFLDGLEV 123
            LKVTWVKVN DFGSIFSTLLPGTMAKLEPPEG SFLDGLEV
Sbjct: 1028 LKVTWVKVNNDFGSIFSTLLPGTMAKLEPPEGGSFLDGLEV 1068


>ref|XP_002326795.1| condensin complex components subunit [Populus trichocarpa]
            gi|222834117|gb|EEE72594.1| condensin complex components
            subunit [Populus trichocarpa]
          Length = 1176

 Score =  109 bits (273), Expect(2) = 2e-40
 Identities = 55/68 (80%), Positives = 55/68 (80%)
 Frame = +3

Query: 126  VAFGSVWKQSLSELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVDAALDLSHTQNIGRMI 305
            VAFGSVWKQSLSELSGGQR             FKPAPLYILDEVDAALDLSHTQNIGRMI
Sbjct: 1070 VAFGSVWKQSLSELSGGQRSLLALSLILALLLFKPAPLYILDEVDAALDLSHTQNIGRMI 1129

Query: 306  KAHFPHSQ 329
            KAHFPHSQ
Sbjct: 1130 KAHFPHSQ 1137



 Score = 81.6 bits (200), Expect(2) = 2e-40
 Identities = 38/41 (92%), Positives = 39/41 (95%)
 Frame = +1

Query: 1    LKVTWVKVNKDFGSIFSTLLPGTMAKLEPPEGSSFLDGLEV 123
            LKVTWVKVN DFGS+FSTLLPGTMAKLEPPEG SFLDGLEV
Sbjct: 1028 LKVTWVKVNNDFGSVFSTLLPGTMAKLEPPEGCSFLDGLEV 1068


>ref|XP_002269854.1| PREDICTED: structural maintenance of chromosomes protein 2-1 [Vitis
            vinifera]
          Length = 1176

 Score =  108 bits (270), Expect(2) = 2e-40
 Identities = 54/68 (79%), Positives = 55/68 (80%)
 Frame = +3

Query: 126  VAFGSVWKQSLSELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVDAALDLSHTQNIGRMI 305
            VAFGSVWKQSLSELSGGQR             FKPAPLYILDEVDAALDLSHTQNIGRMI
Sbjct: 1070 VAFGSVWKQSLSELSGGQRSLLALSLILALLLFKPAPLYILDEVDAALDLSHTQNIGRMI 1129

Query: 306  KAHFPHSQ 329
            K+HFPHSQ
Sbjct: 1130 KSHFPHSQ 1137



 Score = 82.4 bits (202), Expect(2) = 2e-40
 Identities = 39/41 (95%), Positives = 39/41 (95%)
 Frame = +1

Query: 1    LKVTWVKVNKDFGSIFSTLLPGTMAKLEPPEGSSFLDGLEV 123
            LKVTW KVNKDFGSIFSTLLPGTMAKLEPPEG SFLDGLEV
Sbjct: 1028 LKVTWTKVNKDFGSIFSTLLPGTMAKLEPPEGCSFLDGLEV 1068


>ref|XP_002864790.1| hypothetical protein ARALYDRAFT_496418 [Arabidopsis lyrata subsp.
            lyrata] gi|297310625|gb|EFH41049.1| hypothetical protein
            ARALYDRAFT_496418 [Arabidopsis lyrata subsp. lyrata]
          Length = 1175

 Score =  108 bits (269), Expect(2) = 2e-40
 Identities = 54/68 (79%), Positives = 54/68 (79%)
 Frame = +3

Query: 126  VAFGSVWKQSLSELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVDAALDLSHTQNIGRMI 305
            VAFG VWKQSLSELSGGQR             FKPAPLYILDEVDAALDLSHTQNIGRMI
Sbjct: 1070 VAFGKVWKQSLSELSGGQRSLLALSLILALLLFKPAPLYILDEVDAALDLSHTQNIGRMI 1129

Query: 306  KAHFPHSQ 329
            KAHFPHSQ
Sbjct: 1130 KAHFPHSQ 1137



 Score = 82.8 bits (203), Expect(2) = 2e-40
 Identities = 39/41 (95%), Positives = 40/41 (97%)
 Frame = +1

Query: 1    LKVTWVKVNKDFGSIFSTLLPGTMAKLEPPEGSSFLDGLEV 123
            LKVTWVKVN+DFGSIFSTLLPGTMAKLEPPEG SFLDGLEV
Sbjct: 1028 LKVTWVKVNQDFGSIFSTLLPGTMAKLEPPEGGSFLDGLEV 1068


>emb|CBI24628.3| unnamed protein product [Vitis vinifera]
          Length = 1171

 Score =  108 bits (270), Expect(2) = 2e-40
 Identities = 54/68 (79%), Positives = 55/68 (80%)
 Frame = +3

Query: 126  VAFGSVWKQSLSELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVDAALDLSHTQNIGRMI 305
            VAFGSVWKQSLSELSGGQR             FKPAPLYILDEVDAALDLSHTQNIGRMI
Sbjct: 1065 VAFGSVWKQSLSELSGGQRSLLALSLILALLLFKPAPLYILDEVDAALDLSHTQNIGRMI 1124

Query: 306  KAHFPHSQ 329
            K+HFPHSQ
Sbjct: 1125 KSHFPHSQ 1132



 Score = 82.4 bits (202), Expect(2) = 2e-40
 Identities = 39/41 (95%), Positives = 39/41 (95%)
 Frame = +1

Query: 1    LKVTWVKVNKDFGSIFSTLLPGTMAKLEPPEGSSFLDGLEV 123
            LKVTW KVNKDFGSIFSTLLPGTMAKLEPPEG SFLDGLEV
Sbjct: 1023 LKVTWTKVNKDFGSIFSTLLPGTMAKLEPPEGCSFLDGLEV 1063


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