BLASTX nr result
ID: Dioscorea21_contig00039253
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00039253 (329 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002510963.1| Structural maintenance of chromosome, putati... 109 9e-41 ref|XP_002326795.1| condensin complex components subunit [Populu... 109 2e-40 ref|XP_002269854.1| PREDICTED: structural maintenance of chromos... 108 2e-40 ref|XP_002864790.1| hypothetical protein ARALYDRAFT_496418 [Arab... 108 2e-40 emb|CBI24628.3| unnamed protein product [Vitis vinifera] 108 2e-40 >ref|XP_002510963.1| Structural maintenance of chromosome, putative [Ricinus communis] gi|223550078|gb|EEF51565.1| Structural maintenance of chromosome, putative [Ricinus communis] Length = 1176 Score = 109 bits (273), Expect(2) = 9e-41 Identities = 55/68 (80%), Positives = 55/68 (80%) Frame = +3 Query: 126 VAFGSVWKQSLSELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVDAALDLSHTQNIGRMI 305 VAFGSVWKQSLSELSGGQR FKPAPLYILDEVDAALDLSHTQNIGRMI Sbjct: 1070 VAFGSVWKQSLSELSGGQRSLLALSLILALLLFKPAPLYILDEVDAALDLSHTQNIGRMI 1129 Query: 306 KAHFPHSQ 329 KAHFPHSQ Sbjct: 1130 KAHFPHSQ 1137 Score = 82.4 bits (202), Expect(2) = 9e-41 Identities = 39/41 (95%), Positives = 39/41 (95%) Frame = +1 Query: 1 LKVTWVKVNKDFGSIFSTLLPGTMAKLEPPEGSSFLDGLEV 123 LKVTWVKVN DFGSIFSTLLPGTMAKLEPPEG SFLDGLEV Sbjct: 1028 LKVTWVKVNNDFGSIFSTLLPGTMAKLEPPEGGSFLDGLEV 1068 >ref|XP_002326795.1| condensin complex components subunit [Populus trichocarpa] gi|222834117|gb|EEE72594.1| condensin complex components subunit [Populus trichocarpa] Length = 1176 Score = 109 bits (273), Expect(2) = 2e-40 Identities = 55/68 (80%), Positives = 55/68 (80%) Frame = +3 Query: 126 VAFGSVWKQSLSELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVDAALDLSHTQNIGRMI 305 VAFGSVWKQSLSELSGGQR FKPAPLYILDEVDAALDLSHTQNIGRMI Sbjct: 1070 VAFGSVWKQSLSELSGGQRSLLALSLILALLLFKPAPLYILDEVDAALDLSHTQNIGRMI 1129 Query: 306 KAHFPHSQ 329 KAHFPHSQ Sbjct: 1130 KAHFPHSQ 1137 Score = 81.6 bits (200), Expect(2) = 2e-40 Identities = 38/41 (92%), Positives = 39/41 (95%) Frame = +1 Query: 1 LKVTWVKVNKDFGSIFSTLLPGTMAKLEPPEGSSFLDGLEV 123 LKVTWVKVN DFGS+FSTLLPGTMAKLEPPEG SFLDGLEV Sbjct: 1028 LKVTWVKVNNDFGSVFSTLLPGTMAKLEPPEGCSFLDGLEV 1068 >ref|XP_002269854.1| PREDICTED: structural maintenance of chromosomes protein 2-1 [Vitis vinifera] Length = 1176 Score = 108 bits (270), Expect(2) = 2e-40 Identities = 54/68 (79%), Positives = 55/68 (80%) Frame = +3 Query: 126 VAFGSVWKQSLSELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVDAALDLSHTQNIGRMI 305 VAFGSVWKQSLSELSGGQR FKPAPLYILDEVDAALDLSHTQNIGRMI Sbjct: 1070 VAFGSVWKQSLSELSGGQRSLLALSLILALLLFKPAPLYILDEVDAALDLSHTQNIGRMI 1129 Query: 306 KAHFPHSQ 329 K+HFPHSQ Sbjct: 1130 KSHFPHSQ 1137 Score = 82.4 bits (202), Expect(2) = 2e-40 Identities = 39/41 (95%), Positives = 39/41 (95%) Frame = +1 Query: 1 LKVTWVKVNKDFGSIFSTLLPGTMAKLEPPEGSSFLDGLEV 123 LKVTW KVNKDFGSIFSTLLPGTMAKLEPPEG SFLDGLEV Sbjct: 1028 LKVTWTKVNKDFGSIFSTLLPGTMAKLEPPEGCSFLDGLEV 1068 >ref|XP_002864790.1| hypothetical protein ARALYDRAFT_496418 [Arabidopsis lyrata subsp. lyrata] gi|297310625|gb|EFH41049.1| hypothetical protein ARALYDRAFT_496418 [Arabidopsis lyrata subsp. lyrata] Length = 1175 Score = 108 bits (269), Expect(2) = 2e-40 Identities = 54/68 (79%), Positives = 54/68 (79%) Frame = +3 Query: 126 VAFGSVWKQSLSELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVDAALDLSHTQNIGRMI 305 VAFG VWKQSLSELSGGQR FKPAPLYILDEVDAALDLSHTQNIGRMI Sbjct: 1070 VAFGKVWKQSLSELSGGQRSLLALSLILALLLFKPAPLYILDEVDAALDLSHTQNIGRMI 1129 Query: 306 KAHFPHSQ 329 KAHFPHSQ Sbjct: 1130 KAHFPHSQ 1137 Score = 82.8 bits (203), Expect(2) = 2e-40 Identities = 39/41 (95%), Positives = 40/41 (97%) Frame = +1 Query: 1 LKVTWVKVNKDFGSIFSTLLPGTMAKLEPPEGSSFLDGLEV 123 LKVTWVKVN+DFGSIFSTLLPGTMAKLEPPEG SFLDGLEV Sbjct: 1028 LKVTWVKVNQDFGSIFSTLLPGTMAKLEPPEGGSFLDGLEV 1068 >emb|CBI24628.3| unnamed protein product [Vitis vinifera] Length = 1171 Score = 108 bits (270), Expect(2) = 2e-40 Identities = 54/68 (79%), Positives = 55/68 (80%) Frame = +3 Query: 126 VAFGSVWKQSLSELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVDAALDLSHTQNIGRMI 305 VAFGSVWKQSLSELSGGQR FKPAPLYILDEVDAALDLSHTQNIGRMI Sbjct: 1065 VAFGSVWKQSLSELSGGQRSLLALSLILALLLFKPAPLYILDEVDAALDLSHTQNIGRMI 1124 Query: 306 KAHFPHSQ 329 K+HFPHSQ Sbjct: 1125 KSHFPHSQ 1132 Score = 82.4 bits (202), Expect(2) = 2e-40 Identities = 39/41 (95%), Positives = 39/41 (95%) Frame = +1 Query: 1 LKVTWVKVNKDFGSIFSTLLPGTMAKLEPPEGSSFLDGLEV 123 LKVTW KVNKDFGSIFSTLLPGTMAKLEPPEG SFLDGLEV Sbjct: 1023 LKVTWTKVNKDFGSIFSTLLPGTMAKLEPPEGCSFLDGLEV 1063