BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00039247
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEQ37164.1| NADH dehydrogenase subunit 1 (chloroplast) [Ginkg...    64   1e-11
ref|YP_005352758.1| ndhA gene product (chloroplast) [Ginkgo bilo...    64   1e-11
ref|YP_001381679.1| NADH-plastoquinone oxidoreductase subunit 1 ...    70   2e-10
emb|CBI32733.3| unnamed protein product [Vitis vinifera]               52   6e-10
ref|YP_007375101.1| NADH-plastoquinone oxidoreductase subunit 1 ...    62   4e-08

>gb|AEQ37164.1| NADH dehydrogenase subunit 1 (chloroplast) [Ginkgo biloba]
          Length = 209

 Score = 64.3 bits (155), Expect(2) = 1e-11
 Identities = 27/33 (81%), Positives = 30/33 (90%)
 Frame = +3

Query: 222 CYYRL*LSNSLSTVDIVEAQSKYGFWGWNLWRQ 320
           C +RL L NSLSTVDI+EAQS+YGFWGWNLWRQ
Sbjct: 22  CSHRLQLPNSLSTVDIIEAQSRYGFWGWNLWRQ 54



 Score = 29.6 bits (65), Expect(2) = 1e-11
 Identities = 15/20 (75%), Positives = 17/20 (85%)
 Frame = +2

Query: 155 IEEPYEAEVSCTVLE*R*EQ 214
           +EEPYEA+VS TVLE R EQ
Sbjct: 1   MEEPYEAKVSRTVLEKRLEQ 20


>ref|YP_005352758.1| ndhA gene product (chloroplast) [Ginkgo biloba]
           gi|372862389|gb|AEX98471.1| NADH dehydrogenase subunit 1
           (chloroplast) [Ginkgo biloba]
           gi|372862811|gb|AEX98888.1| NADH dehydrogenase subunit 1
           (chloroplast) [Ginkgo biloba]
           gi|372862981|gb|AEX99056.1| NADH dehydrogenase subunit 1
           (chloroplast) [Ginkgo biloba]
          Length = 209

 Score = 64.3 bits (155), Expect(2) = 1e-11
 Identities = 27/33 (81%), Positives = 30/33 (90%)
 Frame = +3

Query: 222 CYYRL*LSNSLSTVDIVEAQSKYGFWGWNLWRQ 320
           C +RL L NSLSTVDI+EAQS+YGFWGWNLWRQ
Sbjct: 22  CSHRLQLPNSLSTVDIIEAQSRYGFWGWNLWRQ 54



 Score = 29.6 bits (65), Expect(2) = 1e-11
 Identities = 15/20 (75%), Positives = 17/20 (85%)
 Frame = +2

Query: 155 IEEPYEAEVSCTVLE*R*EQ 214
           +EEPYEA+VS TVLE R EQ
Sbjct: 1   MEEPYEAKVSRTVLEKRLEQ 20


>ref|YP_001381679.1| NADH-plastoquinone oxidoreductase subunit 1 [Medicago truncatula]
          Length = 369

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 30/33 (90%), Positives = 32/33 (96%)
 Frame = +3

Query: 222 CYYRL*LSNSLSTVDIVEAQSKYGFWGWNLWRQ 320
           CY+RL LSNSLSTVDIV+AQSKYGFWGWNLWRQ
Sbjct: 185 CYHRLGLSNSLSTVDIVDAQSKYGFWGWNLWRQ 217


>emb|CBI32733.3| unnamed protein product [Vitis vinifera]
          Length = 176

 Score = 52.0 bits (123), Expect(2) = 6e-10
 Identities = 22/24 (91%), Positives = 24/24 (100%)
 Frame = -3

Query: 310 RFHPQKPYFDCASTISTVLKLLDN 239
           +FHPQKPYFDCASTISTVL+LLDN
Sbjct: 106 KFHPQKPYFDCASTISTVLELLDN 129



 Score = 36.6 bits (83), Expect(2) = 6e-10
 Identities = 22/39 (56%), Positives = 25/39 (64%), Gaps = 5/39 (12%)
 Frame = -2

Query: 209 PIAIPKPYMRPQLHTAPLWLQINVRTDSV-----NIFVG 108
           PIAI +PYMR  LHTAP    IN+ T SV     +IFVG
Sbjct: 138 PIAITEPYMRFSLHTAPRGPIINLGTGSVLFIYLDIFVG 176


>ref|YP_007375101.1| NADH-plastoquinone oxidoreductase subunit 1 [Quercus rubra]
           gi|441421980|gb|AGC31304.1| NADH-plastoquinone
           oxidoreductase subunit 1 [Quercus rubra]
          Length = 363

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 27/27 (100%), Positives = 27/27 (100%)
 Frame = +3

Query: 240 LSNSLSTVDIVEAQSKYGFWGWNLWRQ 320
           LSNSLSTVDIVEAQSKYGFWGWNLWRQ
Sbjct: 185 LSNSLSTVDIVEAQSKYGFWGWNLWRQ 211