BLASTX nr result

ID: Dioscorea21_contig00039166 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00039166
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE59331.1| hypothetical protein OsJ_11408 [Oryza sativa Japo...   119   3e-25
ref|NP_001050460.1| Os03g0441400 [Oryza sativa Japonica Group] g...   119   3e-25
gb|AAL93067.1|AC093180_14 hypothetical protein [Oryza sativa Jap...   119   3e-25
ref|XP_002263197.2| PREDICTED: putative pentatricopeptide repeat...   117   7e-25
ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat...   117   7e-25

>gb|EEE59331.1| hypothetical protein OsJ_11408 [Oryza sativa Japonica Group]
          Length = 691

 Score =  119 bits (298), Expect = 3e-25
 Identities = 55/92 (59%), Positives = 74/92 (80%)
 Frame = -1

Query: 276 ALHGLAEDALSIFSKMNQMNVRANAVTFVGVLSACSNIGLVNEGLSYFNSMTPEYGIEPS 97
           ALHG A DAL +F +MN+ NV +N +TFV +LS CS+ GLVN GLS F+SM  ++GI+PS
Sbjct: 542 ALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPS 601

Query: 96  IEHYTCMVRLLGHSGRLDEAVKFIDKIPAEPS 1
           +EHYTC+VRLLG +GRL++A++FI  IP+ PS
Sbjct: 602 MEHYTCIVRLLGRAGRLNDALQFIGDIPSAPS 633


>ref|NP_001050460.1| Os03g0441400 [Oryza sativa Japonica Group]
           gi|108709057|gb|ABF96852.1| pentatricopeptide, putative,
           expressed [Oryza sativa Japonica Group]
           gi|113548931|dbj|BAF12374.1| Os03g0441400 [Oryza sativa
           Japonica Group] gi|215767379|dbj|BAG99607.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 837

 Score =  119 bits (298), Expect = 3e-25
 Identities = 55/92 (59%), Positives = 74/92 (80%)
 Frame = -1

Query: 276 ALHGLAEDALSIFSKMNQMNVRANAVTFVGVLSACSNIGLVNEGLSYFNSMTPEYGIEPS 97
           ALHG A DAL +F +MN+ NV +N +TFV +LS CS+ GLVN GLS F+SM  ++GI+PS
Sbjct: 542 ALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPS 601

Query: 96  IEHYTCMVRLLGHSGRLDEAVKFIDKIPAEPS 1
           +EHYTC+VRLLG +GRL++A++FI  IP+ PS
Sbjct: 602 MEHYTCIVRLLGRAGRLNDALQFIGDIPSAPS 633


>gb|AAL93067.1|AC093180_14 hypothetical protein [Oryza sativa Japonica Group]
          Length = 1012

 Score =  119 bits (298), Expect = 3e-25
 Identities = 55/92 (59%), Positives = 74/92 (80%)
 Frame = -1

Query: 276 ALHGLAEDALSIFSKMNQMNVRANAVTFVGVLSACSNIGLVNEGLSYFNSMTPEYGIEPS 97
           ALHG A DAL +F +MN+ NV +N +TFV +LS CS+ GLVN GLS F+SM  ++GI+PS
Sbjct: 542 ALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPS 601

Query: 96  IEHYTCMVRLLGHSGRLDEAVKFIDKIPAEPS 1
           +EHYTC+VRLLG +GRL++A++FI  IP+ PS
Sbjct: 602 MEHYTCIVRLLGRAGRLNDALQFIGDIPSAPS 633


>ref|XP_002263197.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Vitis vinifera]
          Length = 611

 Score =  117 bits (294), Expect = 7e-25
 Identities = 54/92 (58%), Positives = 71/92 (77%)
 Frame = -1

Query: 276 ALHGLAEDALSIFSKMNQMNVRANAVTFVGVLSACSNIGLVNEGLSYFNSMTPEYGIEPS 97
           ++HGL  +AL IF KM +  V+ + +TFVGVLSAC+N GL+++G +YF SM  ++GIEP 
Sbjct: 316 SMHGLGREALRIFDKMQETEVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEPC 375

Query: 96  IEHYTCMVRLLGHSGRLDEAVKFIDKIPAEPS 1
           IEHYTCMV LLG  G LD+AVK ID+IP +PS
Sbjct: 376 IEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPS 407


>ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Glycine max]
          Length = 780

 Score =  117 bits (294), Expect = 7e-25
 Identities = 55/92 (59%), Positives = 71/92 (77%)
 Frame = -1

Query: 276 ALHGLAEDALSIFSKMNQMNVRANAVTFVGVLSACSNIGLVNEGLSYFNSMTPEYGIEPS 97
           ++HGL  +AL++F  M Q N + N +TFVGVLSACSN GL+++G ++F SM  +YGIEP 
Sbjct: 485 SIHGLGMEALNLFDMMQQSNSKPNKLTFVGVLSACSNAGLLDKGRAHFKSMLQDYGIEPC 544

Query: 96  IEHYTCMVRLLGHSGRLDEAVKFIDKIPAEPS 1
           IEHYTCMV LLG SG+ DEAVK I +IP +PS
Sbjct: 545 IEHYTCMVWLLGRSGQFDEAVKLIGEIPFQPS 576


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