BLASTX nr result
ID: Dioscorea21_contig00039126
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00039126
(272 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003632478.1| PREDICTED: pentatricopeptide repeat-containi... 127 1e-27
emb|CBI33142.3| unnamed protein product [Vitis vinifera] 127 1e-27
emb|CAN70653.1| hypothetical protein VITISV_010023 [Vitis vinifera] 127 1e-27
ref|XP_003574661.1| PREDICTED: pentatricopeptide repeat-containi... 119 3e-25
ref|NP_001062062.1| Os08g0481000 [Oryza sativa Japonica Group] g... 114 6e-24
>ref|XP_003632478.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 590
Score = 127 bits (318), Expect = 1e-27
Identities = 58/90 (64%), Positives = 78/90 (86%)
Frame = +2
Query: 2 SYNAVISGFVRFDRMDDAVRIFEAMPMRNVISYTAMVDGFARNGEVDKARELFDQMLKKN 181
S+NA+ISG VR+DR+++A R+FE MP RNVISYTAMVDG+A+ GE+++AR LF+ M +KN
Sbjct: 142 SWNAMISGLVRYDRVEEASRLFEEMPRRNVISYTAMVDGYAKIGEIEQARALFNCMPQKN 201
Query: 182 AVSWTVMISGYVENERFEDARKLFDEMPEK 271
VSWTVMISGYVEN +F++A LF++MP+K
Sbjct: 202 VVSWTVMISGYVENGKFDEAENLFEQMPDK 231
Score = 84.0 bits (206), Expect = 1e-14
Identities = 35/88 (39%), Positives = 58/88 (65%)
Frame = +2
Query: 2 SYNAVISGFVRFDRMDDAVRIFEAMPMRNVISYTAMVDGFARNGEVDKARELFDQMLKKN 181
SY A++ G+ + ++ A +F MP +NV+S+T M+ G+ NG+ D+A LF+QM KN
Sbjct: 173 SYTAMVDGYAKIGEIEQARALFNCMPQKNVVSWTVMISGYVENGKFDEAENLFEQMPDKN 232
Query: 182 AVSWTVMISGYVENERFEDARKLFDEMP 265
V+ T MI+GY + + + A+ LFD++P
Sbjct: 233 IVAMTAMITGYCKEGKTDKAKILFDQIP 260
Score = 82.0 bits (201), Expect = 5e-14
Identities = 36/87 (41%), Positives = 58/87 (66%)
Frame = +2
Query: 2 SYNAVISGFVRFDRMDDAVRIFEAMPMRNVISYTAMVDGFARNGEVDKARELFDQMLKKN 181
S+ +ISG+V + D+A +FE MP +N+++ TAM+ G+ + G+ DKA+ LFDQ+ ++
Sbjct: 204 SWTVMISGYVENGKFDEAENLFEQMPDKNIVAMTAMITGYCKEGKTDKAKILFDQIPCRD 263
Query: 182 AVSWTVMISGYVENERFEDARKLFDEM 262
SW MI+GY +N E+A KL +M
Sbjct: 264 LASWNAMITGYAQNGSGEEALKLHSQM 290
Score = 78.6 bits (192), Expect = 5e-13
Identities = 34/90 (37%), Positives = 59/90 (65%)
Frame = +2
Query: 2 SYNAVISGFVRFDRMDDAVRIFEAMPMRNVISYTAMVDGFARNGEVDKARELFDQMLKKN 181
S+N++I+G+ + D++ R+F MP +NV+S+ +M+ G + +D+A + F M ++N
Sbjct: 80 SWNSIITGYWKNGCFDESKRLFGLMPTKNVVSWNSMIAGCIEDERIDEAWQYFQAMPQRN 139
Query: 182 AVSWTVMISGYVENERFEDARKLFDEMPEK 271
SW MISG V +R E+A +LF+EMP +
Sbjct: 140 TASWNAMISGLVRYDRVEEASRLFEEMPRR 169
Score = 70.9 bits (172), Expect = 1e-10
Identities = 31/90 (34%), Positives = 56/90 (62%)
Frame = +2
Query: 2 SYNAVISGFVRFDRMDDAVRIFEAMPMRNVISYTAMVDGFARNGEVDKARELFDQMLKKN 181
++N I R + A ++F+ MP R+ +S+ +++ G+ +NG D+++ LF M KN
Sbjct: 49 AFNVQIGNLARAGNIGAARQLFDEMPHRDTVSWNSIITGYWKNGCFDESKRLFGLMPTKN 108
Query: 182 AVSWTVMISGYVENERFEDARKLFDEMPEK 271
VSW MI+G +E+ER ++A + F MP++
Sbjct: 109 VVSWNSMIAGCIEDERIDEAWQYFQAMPQR 138
Score = 54.7 bits (130), Expect = 8e-06
Identities = 23/63 (36%), Positives = 41/63 (65%)
Frame = +2
Query: 83 RNVISYTAMVDGFARNGEVDKARELFDQMLKKNAVSWTVMISGYVENERFEDARKLFDEM 262
++V ++ + AR G + AR+LFD+M ++ VSW +I+GY +N F+++++LF M
Sbjct: 45 QDVYAFNVQIGNLARAGNIGAARQLFDEMPHRDTVSWNSIITGYWKNGCFDESKRLFGLM 104
Query: 263 PEK 271
P K
Sbjct: 105 PTK 107
>emb|CBI33142.3| unnamed protein product [Vitis vinifera]
Length = 1198
Score = 127 bits (318), Expect = 1e-27
Identities = 58/90 (64%), Positives = 78/90 (86%)
Frame = +2
Query: 2 SYNAVISGFVRFDRMDDAVRIFEAMPMRNVISYTAMVDGFARNGEVDKARELFDQMLKKN 181
S+NA+ISG VR+DR+++A R+FE MP RNVISYTAMVDG+A+ GE+++AR LF+ M +KN
Sbjct: 70 SWNAMISGLVRYDRVEEASRLFEEMPRRNVISYTAMVDGYAKIGEIEQARALFNCMPQKN 129
Query: 182 AVSWTVMISGYVENERFEDARKLFDEMPEK 271
VSWTVMISGYVEN +F++A LF++MP+K
Sbjct: 130 VVSWTVMISGYVENGKFDEAENLFEQMPDK 159
Score = 84.0 bits (206), Expect = 1e-14
Identities = 35/88 (39%), Positives = 58/88 (65%)
Frame = +2
Query: 2 SYNAVISGFVRFDRMDDAVRIFEAMPMRNVISYTAMVDGFARNGEVDKARELFDQMLKKN 181
SY A++ G+ + ++ A +F MP +NV+S+T M+ G+ NG+ D+A LF+QM KN
Sbjct: 101 SYTAMVDGYAKIGEIEQARALFNCMPQKNVVSWTVMISGYVENGKFDEAENLFEQMPDKN 160
Query: 182 AVSWTVMISGYVENERFEDARKLFDEMP 265
V+ T MI+GY + + + A+ LFD++P
Sbjct: 161 IVAMTAMITGYCKEGKTDKAKILFDQIP 188
Score = 82.0 bits (201), Expect = 5e-14
Identities = 36/87 (41%), Positives = 58/87 (66%)
Frame = +2
Query: 2 SYNAVISGFVRFDRMDDAVRIFEAMPMRNVISYTAMVDGFARNGEVDKARELFDQMLKKN 181
S+ +ISG+V + D+A +FE MP +N+++ TAM+ G+ + G+ DKA+ LFDQ+ ++
Sbjct: 132 SWTVMISGYVENGKFDEAENLFEQMPDKNIVAMTAMITGYCKEGKTDKAKILFDQIPCRD 191
Query: 182 AVSWTVMISGYVENERFEDARKLFDEM 262
SW MI+GY +N E+A KL +M
Sbjct: 192 LASWNAMITGYAQNGSGEEALKLHSQM 218
Score = 78.6 bits (192), Expect = 5e-13
Identities = 34/90 (37%), Positives = 59/90 (65%)
Frame = +2
Query: 2 SYNAVISGFVRFDRMDDAVRIFEAMPMRNVISYTAMVDGFARNGEVDKARELFDQMLKKN 181
S+N++I+G+ + D++ R+F MP +NV+S+ +M+ G + +D+A + F M ++N
Sbjct: 8 SWNSIITGYWKNGCFDESKRLFGLMPTKNVVSWNSMIAGCIEDERIDEAWQYFQAMPQRN 67
Query: 182 AVSWTVMISGYVENERFEDARKLFDEMPEK 271
SW MISG V +R E+A +LF+EMP +
Sbjct: 68 TASWNAMISGLVRYDRVEEASRLFEEMPRR 97
Score = 62.0 bits (149), Expect = 5e-08
Identities = 26/66 (39%), Positives = 45/66 (68%)
Frame = +2
Query: 74 MPMRNVISYTAMVDGFARNGEVDKARELFDQMLKKNAVSWTVMISGYVENERFEDARKLF 253
MP R+ +S+ +++ G+ +NG D+++ LF M KN VSW MI+G +E+ER ++A + F
Sbjct: 1 MPHRDTVSWNSIITGYWKNGCFDESKRLFGLMPTKNVVSWNSMIAGCIEDERIDEAWQYF 60
Query: 254 DEMPEK 271
MP++
Sbjct: 61 QAMPQR 66
>emb|CAN70653.1| hypothetical protein VITISV_010023 [Vitis vinifera]
Length = 1301
Score = 127 bits (318), Expect = 1e-27
Identities = 58/90 (64%), Positives = 78/90 (86%)
Frame = +2
Query: 2 SYNAVISGFVRFDRMDDAVRIFEAMPMRNVISYTAMVDGFARNGEVDKARELFDQMLKKN 181
S+NA+ISG VR+DR+++A R+FE MP RNVISYTAMVDG+A+ GE+++AR LF+ M +KN
Sbjct: 142 SWNAMISGLVRYDRVEEASRLFEEMPRRNVISYTAMVDGYAKIGEIEQARALFNCMPQKN 201
Query: 182 AVSWTVMISGYVENERFEDARKLFDEMPEK 271
VSWTVMISGYVEN +F++A LF++MP+K
Sbjct: 202 VVSWTVMISGYVENGKFDEAENLFEQMPDK 231
Score = 84.0 bits (206), Expect = 1e-14
Identities = 35/88 (39%), Positives = 58/88 (65%)
Frame = +2
Query: 2 SYNAVISGFVRFDRMDDAVRIFEAMPMRNVISYTAMVDGFARNGEVDKARELFDQMLKKN 181
SY A++ G+ + ++ A +F MP +NV+S+T M+ G+ NG+ D+A LF+QM KN
Sbjct: 173 SYTAMVDGYAKIGEIEQARALFNCMPQKNVVSWTVMISGYVENGKFDEAENLFEQMPDKN 232
Query: 182 AVSWTVMISGYVENERFEDARKLFDEMP 265
V+ T MI+GY + + + A+ LFD++P
Sbjct: 233 IVAMTAMITGYCKEGKTDKAKILFDQIP 260
Score = 82.0 bits (201), Expect = 5e-14
Identities = 36/87 (41%), Positives = 58/87 (66%)
Frame = +2
Query: 2 SYNAVISGFVRFDRMDDAVRIFEAMPMRNVISYTAMVDGFARNGEVDKARELFDQMLKKN 181
S+ +ISG+V + D+A +FE MP +N+++ TAM+ G+ + G+ DKA+ LFDQ+ ++
Sbjct: 204 SWTVMISGYVENGKFDEAENLFEQMPDKNIVAMTAMITGYCKEGKTDKAKILFDQIPCRD 263
Query: 182 AVSWTVMISGYVENERFEDARKLFDEM 262
SW MI+GY +N E+A KL +M
Sbjct: 264 LASWNAMITGYAQNGSGEEALKLHSQM 290
Score = 78.6 bits (192), Expect = 5e-13
Identities = 34/90 (37%), Positives = 59/90 (65%)
Frame = +2
Query: 2 SYNAVISGFVRFDRMDDAVRIFEAMPMRNVISYTAMVDGFARNGEVDKARELFDQMLKKN 181
S+N++I+G+ + D++ R+F MP +NV+S+ +M+ G + +D+A + F M ++N
Sbjct: 80 SWNSIITGYWKNGCFDESKRLFGLMPTKNVVSWNSMIAGCIEDERIDEAWQYFQAMPQRN 139
Query: 182 AVSWTVMISGYVENERFEDARKLFDEMPEK 271
SW MISG V +R E+A +LF+EMP +
Sbjct: 140 TASWNAMISGLVRYDRVEEASRLFEEMPRR 169
Score = 71.2 bits (173), Expect = 8e-11
Identities = 31/90 (34%), Positives = 56/90 (62%)
Frame = +2
Query: 2 SYNAVISGFVRFDRMDDAVRIFEAMPMRNVISYTAMVDGFARNGEVDKARELFDQMLKKN 181
++N I R + A ++F+ MP R+ +S+ +++ G+ +NG D+++ LF M KN
Sbjct: 49 AFNVQIGNLARAGNIGAARQVFDEMPHRDTVSWNSIITGYWKNGCFDESKRLFGLMPTKN 108
Query: 182 AVSWTVMISGYVENERFEDARKLFDEMPEK 271
VSW MI+G +E+ER ++A + F MP++
Sbjct: 109 VVSWNSMIAGCIEDERIDEAWQYFQAMPQR 138
>ref|XP_003574661.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 553
Score = 119 bits (297), Expect = 3e-25
Identities = 55/90 (61%), Positives = 70/90 (77%)
Frame = +2
Query: 2 SYNAVISGFVRFDRMDDAVRIFEAMPMRNVISYTAMVDGFARNGEVDKARELFDQMLKKN 181
S+NA+++G VR RMDDA +F MP RNV+SYT MVDG AR GEV +ARE+FD M ++N
Sbjct: 103 SWNAMLAGLVRLGRMDDAWALFGEMPQRNVVSYTTMVDGLARRGEVARAREVFDAMPERN 162
Query: 182 AVSWTVMISGYVENERFEDARKLFDEMPEK 271
VSW MI+GYVEN F++ARKLF+ MP+K
Sbjct: 163 LVSWAAMITGYVENAMFDEARKLFEAMPDK 192
Score = 83.2 bits (204), Expect = 2e-14
Identities = 38/83 (45%), Positives = 59/83 (71%)
Frame = +2
Query: 2 SYNAVISGFVRFDRMDDAVRIFEAMPMRNVISYTAMVDGFARNGEVDKARELFDQMLKKN 181
S+ A+I+G+V D+A ++FEAMP +NV++ TAM+ G+ ++G+V+ AR LFD + K+
Sbjct: 165 SWAAMITGYVENAMFDEARKLFEAMPDKNVVACTAMITGYCKDGDVESARRLFDGIPVKD 224
Query: 182 AVSWTVMISGYVENERFEDARKL 250
+SW MI+GYV N E+A KL
Sbjct: 225 VISWNAMITGYVHNGHGEEAMKL 247
Score = 80.5 bits (197), Expect = 1e-13
Identities = 38/90 (42%), Positives = 57/90 (63%)
Frame = +2
Query: 2 SYNAVISGFVRFDRMDDAVRIFEAMPMRNVISYTAMVDGFARNGEVDKARELFDQMLKKN 181
SY ++ G R + A +F+AMP RN++S+ AM+ G+ N D+AR+LF+ M KN
Sbjct: 134 SYTTMVDGLARRGEVARAREVFDAMPERNLVSWAAMITGYVENAMFDEARKLFEAMPDKN 193
Query: 182 AVSWTVMISGYVENERFEDARKLFDEMPEK 271
V+ T MI+GY ++ E AR+LFD +P K
Sbjct: 194 VVACTAMITGYCKDGDVESARRLFDGIPVK 223
Score = 69.7 bits (169), Expect = 2e-10
Identities = 35/90 (38%), Positives = 52/90 (57%)
Frame = +2
Query: 2 SYNAVISGFVRFDRMDDAVRIFEAMPMRNVISYTAMVDGFARNGEVDKARELFDQMLKKN 181
S+N+V++G + +D A F P RNV S+ AM+ G R G +D A LF +M ++N
Sbjct: 72 SWNSVVAGCLAHGDLDAASAYFARAPRRNVASWNAMLAGLVRLGRMDDAWALFGEMPQRN 131
Query: 182 AVSWTVMISGYVENERFEDARKLFDEMPEK 271
VS+T M+ G AR++FD MPE+
Sbjct: 132 VVSYTTMVDGLARRGEVARAREVFDAMPER 161
Score = 67.8 bits (164), Expect = 9e-10
Identities = 35/91 (38%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Frame = +2
Query: 2 SYNAVISGFVRFDR-MDDAVRIFEAMPMRNVISYTAMVDGFARNGEVDKARELFDQMLKK 178
S+NA+++ R R + A R+F+ MP RNVIS+ ++V G +G++D A F + ++
Sbjct: 40 SWNALLTALWRAGRDLPAARRLFDDMPSRNVISWNSVVAGCLAHGDLDAASAYFARAPRR 99
Query: 179 NAVSWTVMISGYVENERFEDARKLFDEMPEK 271
N SW M++G V R +DA LF EMP++
Sbjct: 100 NVASWNAMLAGLVRLGRMDDAWALFGEMPQR 130
>ref|NP_001062062.1| Os08g0481000 [Oryza sativa Japonica Group]
gi|42409025|dbj|BAD10278.1| pentatricopeptide (PPR)
repeat-containing protein-like [Oryza sativa Japonica
Group] gi|113624031|dbj|BAF23976.1| Os08g0481000 [Oryza
sativa Japonica Group] gi|215715342|dbj|BAG95093.1|
unnamed protein product [Oryza sativa Japonica Group]
gi|222640747|gb|EEE68879.1| hypothetical protein
OsJ_27695 [Oryza sativa Japonica Group]
Length = 563
Score = 114 bits (286), Expect = 6e-24
Identities = 55/90 (61%), Positives = 67/90 (74%)
Frame = +2
Query: 2 SYNAVISGFVRFDRMDDAVRIFEAMPMRNVISYTAMVDGFARNGEVDKARELFDQMLKKN 181
S+NA+++G VR M+DA +F+ MP RNV+SYT MVDG AR GEV ARELFD M +N
Sbjct: 112 SWNAMLAGLVRLGSMEDARSLFDQMPERNVVSYTTMVDGLARCGEVASARELFDAMPTRN 171
Query: 182 AVSWTVMISGYVENERFEDARKLFDEMPEK 271
VSW MISGYV+N E+ARKLF+ MPEK
Sbjct: 172 LVSWAAMISGYVDNNMLEEARKLFEAMPEK 201
Score = 82.8 bits (203), Expect = 3e-14
Identities = 37/84 (44%), Positives = 60/84 (71%)
Frame = +2
Query: 2 SYNAVISGFVRFDRMDDAVRIFEAMPMRNVISYTAMVDGFARNGEVDKARELFDQMLKKN 181
S+ A+ISG+V + +++A ++FEAMP +NV++ TAM+ G+ + G++ AR LFD + K+
Sbjct: 174 SWAAMISGYVDNNMLEEARKLFEAMPEKNVVACTAMITGYCKEGDLQNARRLFDGIRAKD 233
Query: 182 AVSWTVMISGYVENERFEDARKLF 253
+SW +ISGYV N E+A KL+
Sbjct: 234 VISWNAIISGYVHNGLGEEATKLY 257
Score = 77.4 bits (189), Expect = 1e-12
Identities = 35/90 (38%), Positives = 58/90 (64%)
Frame = +2
Query: 2 SYNAVISGFVRFDRMDDAVRIFEAMPMRNVISYTAMVDGFARNGEVDKARELFDQMLKKN 181
SY ++ G R + A +F+AMP RN++S+ AM+ G+ N +++AR+LF+ M +KN
Sbjct: 143 SYTTMVDGLARCGEVASARELFDAMPTRNLVSWAAMISGYVDNNMLEEARKLFEAMPEKN 202
Query: 182 AVSWTVMISGYVENERFEDARKLFDEMPEK 271
V+ T MI+GY + ++AR+LFD + K
Sbjct: 203 VVACTAMITGYCKEGDLQNARRLFDGIRAK 232
Score = 70.9 bits (172), Expect = 1e-10
Identities = 36/90 (40%), Positives = 52/90 (57%)
Frame = +2
Query: 2 SYNAVISGFVRFDRMDDAVRIFEAMPMRNVISYTAMVDGFARNGEVDKARELFDQMLKKN 181
S+N++I+G + + A F P RNV S+ AM+ G R G ++ AR LFDQM ++N
Sbjct: 81 SWNSIIAGCLAHGDLAAASAYFARAPRRNVASWNAMLAGLVRLGSMEDARSLFDQMPERN 140
Query: 182 AVSWTVMISGYVENERFEDARKLFDEMPEK 271
VS+T M+ G AR+LFD MP +
Sbjct: 141 VVSYTTMVDGLARCGEVASARELFDAMPTR 170
Score = 67.8 bits (164), Expect = 9e-10
Identities = 35/91 (38%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Frame = +2
Query: 2 SYNAVISGFVRFDRMDDAVR-IFEAMPMRNVISYTAMVDGFARNGEVDKARELFDQMLKK 178
S+NA+++ R R A R +F+ MP RNVIS+ +++ G +G++ A F + ++
Sbjct: 49 SWNALLTALWRAGRDLPAARSLFDDMPSRNVISWNSIIAGCLAHGDLAAASAYFARAPRR 108
Query: 179 NAVSWTVMISGYVENERFEDARKLFDEMPEK 271
N SW M++G V EDAR LFD+MPE+
Sbjct: 109 NVASWNAMLAGLVRLGSMEDARSLFDQMPER 139