BLASTX nr result

ID: Dioscorea21_contig00039099 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00039099
         (232 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG52507.1|AC016662_1 unknown protein, 5' partial; 35-1255 [A...   107   1e-21
ref|NP_565080.1| Mitochondrial transcription termination factor ...   107   1e-21
ref|XP_002888966.1| hypothetical protein ARALYDRAFT_476555 [Arab...   107   1e-21
dbj|BAE99966.1| hypothetical protein [Arabidopsis thaliana]           107   1e-21
ref|XP_002265430.1| PREDICTED: uncharacterized protein LOC100256...   101   7e-20

>gb|AAG52507.1|AC016662_1 unknown protein, 5' partial; 35-1255 [Arabidopsis thaliana]
          Length = 404

 Score =  107 bits (267), Expect = 1e-21
 Identities = 49/76 (64%), Positives = 62/76 (81%)
 Frame = +1

Query: 1   MLSKGPLNAAIDAKLRVDCLCRHGLIRRDAFKVLAVEPRSILYELEDVEKKIEFLLDKLG 180
           ++S+G   A  + KLRVDCLC++GLIRRDAFKV+  EPR ILYE+ED+EKKIEFL +++G
Sbjct: 232 IISEGAFRAGFEVKLRVDCLCKYGLIRRDAFKVVWKEPRVILYEIEDIEKKIEFLTNRMG 291

Query: 181 CSIECLAEYPEYLGVN 228
             I CLA+ PEYLGVN
Sbjct: 292 FHINCLADVPEYLGVN 307


>ref|NP_565080.1| Mitochondrial transcription termination factor family protein
           [Arabidopsis thaliana]
           gi|12323819|gb|AAG51878.1|AC079678_8 unknown protein;
           33994-35331 [Arabidopsis thaliana]
           gi|332197431|gb|AEE35552.1| Mitochondrial transcription
           termination factor family protein [Arabidopsis thaliana]
          Length = 445

 Score =  107 bits (267), Expect = 1e-21
 Identities = 49/76 (64%), Positives = 62/76 (81%)
 Frame = +1

Query: 1   MLSKGPLNAAIDAKLRVDCLCRHGLIRRDAFKVLAVEPRSILYELEDVEKKIEFLLDKLG 180
           ++S+G   A  + KLRVDCLC++GLIRRDAFKV+  EPR ILYE+ED+EKKIEFL +++G
Sbjct: 273 IISEGAFRAGFEVKLRVDCLCKYGLIRRDAFKVVWKEPRVILYEIEDIEKKIEFLTNRMG 332

Query: 181 CSIECLAEYPEYLGVN 228
             I CLA+ PEYLGVN
Sbjct: 333 FHINCLADVPEYLGVN 348


>ref|XP_002888966.1| hypothetical protein ARALYDRAFT_476555 [Arabidopsis lyrata subsp.
           lyrata] gi|297334807|gb|EFH65225.1| hypothetical protein
           ARALYDRAFT_476555 [Arabidopsis lyrata subsp. lyrata]
          Length = 449

 Score =  107 bits (267), Expect = 1e-21
 Identities = 49/76 (64%), Positives = 62/76 (81%)
 Frame = +1

Query: 1   MLSKGPLNAAIDAKLRVDCLCRHGLIRRDAFKVLAVEPRSILYELEDVEKKIEFLLDKLG 180
           ++S+G   A  + KLRVDCLC++GLIRRDAFKV+  EPR ILYE+ED+EKKIEFL +++G
Sbjct: 277 IISEGAFRAGFEVKLRVDCLCKYGLIRRDAFKVVWKEPRVILYEIEDIEKKIEFLTNRMG 336

Query: 181 CSIECLAEYPEYLGVN 228
             I CLA+ PEYLGVN
Sbjct: 337 FHINCLADVPEYLGVN 352


>dbj|BAE99966.1| hypothetical protein [Arabidopsis thaliana]
          Length = 248

 Score =  107 bits (267), Expect = 1e-21
 Identities = 49/76 (64%), Positives = 62/76 (81%)
 Frame = +1

Query: 1   MLSKGPLNAAIDAKLRVDCLCRHGLIRRDAFKVLAVEPRSILYELEDVEKKIEFLLDKLG 180
           ++S+G   A  + KLRVDCLC++GLIRRDAFKV+  EPR ILYE+ED+EKKIEFL +++G
Sbjct: 76  IISEGAFRAGFEVKLRVDCLCKYGLIRRDAFKVVWKEPRVILYEIEDIEKKIEFLTNRMG 135

Query: 181 CSIECLAEYPEYLGVN 228
             I CLA+ PEYLGVN
Sbjct: 136 FHINCLADVPEYLGVN 151


>ref|XP_002265430.1| PREDICTED: uncharacterized protein LOC100256963 [Vitis vinifera]
           gi|297734077|emb|CBI15324.3| unnamed protein product
           [Vitis vinifera]
          Length = 451

 Score =  101 bits (251), Expect = 7e-20
 Identities = 46/74 (62%), Positives = 60/74 (81%)
 Frame = +1

Query: 10  KGPLNAAIDAKLRVDCLCRHGLIRRDAFKVLAVEPRSILYELEDVEKKIEFLLDKLGCSI 189
           +G L A  + KLRVDCLCR+GLIRR+AF+VL  EPR I+YE+ED+E+KIEFL+ ++  ++
Sbjct: 283 EGALRAGFEVKLRVDCLCRYGLIRREAFEVLWKEPRVIIYEIEDIEEKIEFLVHRMRYNV 342

Query: 190 ECLAEYPEYLGVNF 231
            CL E PEYLGVNF
Sbjct: 343 GCLIEVPEYLGVNF 356


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