BLASTX nr result
ID: Dioscorea21_contig00039099
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00039099 (232 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAG52507.1|AC016662_1 unknown protein, 5' partial; 35-1255 [A... 107 1e-21 ref|NP_565080.1| Mitochondrial transcription termination factor ... 107 1e-21 ref|XP_002888966.1| hypothetical protein ARALYDRAFT_476555 [Arab... 107 1e-21 dbj|BAE99966.1| hypothetical protein [Arabidopsis thaliana] 107 1e-21 ref|XP_002265430.1| PREDICTED: uncharacterized protein LOC100256... 101 7e-20 >gb|AAG52507.1|AC016662_1 unknown protein, 5' partial; 35-1255 [Arabidopsis thaliana] Length = 404 Score = 107 bits (267), Expect = 1e-21 Identities = 49/76 (64%), Positives = 62/76 (81%) Frame = +1 Query: 1 MLSKGPLNAAIDAKLRVDCLCRHGLIRRDAFKVLAVEPRSILYELEDVEKKIEFLLDKLG 180 ++S+G A + KLRVDCLC++GLIRRDAFKV+ EPR ILYE+ED+EKKIEFL +++G Sbjct: 232 IISEGAFRAGFEVKLRVDCLCKYGLIRRDAFKVVWKEPRVILYEIEDIEKKIEFLTNRMG 291 Query: 181 CSIECLAEYPEYLGVN 228 I CLA+ PEYLGVN Sbjct: 292 FHINCLADVPEYLGVN 307 >ref|NP_565080.1| Mitochondrial transcription termination factor family protein [Arabidopsis thaliana] gi|12323819|gb|AAG51878.1|AC079678_8 unknown protein; 33994-35331 [Arabidopsis thaliana] gi|332197431|gb|AEE35552.1| Mitochondrial transcription termination factor family protein [Arabidopsis thaliana] Length = 445 Score = 107 bits (267), Expect = 1e-21 Identities = 49/76 (64%), Positives = 62/76 (81%) Frame = +1 Query: 1 MLSKGPLNAAIDAKLRVDCLCRHGLIRRDAFKVLAVEPRSILYELEDVEKKIEFLLDKLG 180 ++S+G A + KLRVDCLC++GLIRRDAFKV+ EPR ILYE+ED+EKKIEFL +++G Sbjct: 273 IISEGAFRAGFEVKLRVDCLCKYGLIRRDAFKVVWKEPRVILYEIEDIEKKIEFLTNRMG 332 Query: 181 CSIECLAEYPEYLGVN 228 I CLA+ PEYLGVN Sbjct: 333 FHINCLADVPEYLGVN 348 >ref|XP_002888966.1| hypothetical protein ARALYDRAFT_476555 [Arabidopsis lyrata subsp. lyrata] gi|297334807|gb|EFH65225.1| hypothetical protein ARALYDRAFT_476555 [Arabidopsis lyrata subsp. lyrata] Length = 449 Score = 107 bits (267), Expect = 1e-21 Identities = 49/76 (64%), Positives = 62/76 (81%) Frame = +1 Query: 1 MLSKGPLNAAIDAKLRVDCLCRHGLIRRDAFKVLAVEPRSILYELEDVEKKIEFLLDKLG 180 ++S+G A + KLRVDCLC++GLIRRDAFKV+ EPR ILYE+ED+EKKIEFL +++G Sbjct: 277 IISEGAFRAGFEVKLRVDCLCKYGLIRRDAFKVVWKEPRVILYEIEDIEKKIEFLTNRMG 336 Query: 181 CSIECLAEYPEYLGVN 228 I CLA+ PEYLGVN Sbjct: 337 FHINCLADVPEYLGVN 352 >dbj|BAE99966.1| hypothetical protein [Arabidopsis thaliana] Length = 248 Score = 107 bits (267), Expect = 1e-21 Identities = 49/76 (64%), Positives = 62/76 (81%) Frame = +1 Query: 1 MLSKGPLNAAIDAKLRVDCLCRHGLIRRDAFKVLAVEPRSILYELEDVEKKIEFLLDKLG 180 ++S+G A + KLRVDCLC++GLIRRDAFKV+ EPR ILYE+ED+EKKIEFL +++G Sbjct: 76 IISEGAFRAGFEVKLRVDCLCKYGLIRRDAFKVVWKEPRVILYEIEDIEKKIEFLTNRMG 135 Query: 181 CSIECLAEYPEYLGVN 228 I CLA+ PEYLGVN Sbjct: 136 FHINCLADVPEYLGVN 151 >ref|XP_002265430.1| PREDICTED: uncharacterized protein LOC100256963 [Vitis vinifera] gi|297734077|emb|CBI15324.3| unnamed protein product [Vitis vinifera] Length = 451 Score = 101 bits (251), Expect = 7e-20 Identities = 46/74 (62%), Positives = 60/74 (81%) Frame = +1 Query: 10 KGPLNAAIDAKLRVDCLCRHGLIRRDAFKVLAVEPRSILYELEDVEKKIEFLLDKLGCSI 189 +G L A + KLRVDCLCR+GLIRR+AF+VL EPR I+YE+ED+E+KIEFL+ ++ ++ Sbjct: 283 EGALRAGFEVKLRVDCLCRYGLIRREAFEVLWKEPRVIIYEIEDIEEKIEFLVHRMRYNV 342 Query: 190 ECLAEYPEYLGVNF 231 CL E PEYLGVNF Sbjct: 343 GCLIEVPEYLGVNF 356