BLASTX nr result

ID: Dioscorea21_contig00039094 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00039094
         (206 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331697.1| predicted protein [Populus trichocarpa] gi|2...    65   7e-09
ref|XP_002509552.1| Sister chromatid cohesion 1 protein, putativ...    61   8e-08
ref|XP_002868626.1| hypothetical protein ARALYDRAFT_493894 [Arab...    59   3e-07
gb|AAG44842.1|AF281154_1 cohesion family protein SYN2 [Arabidops...    59   4e-07
dbj|BAB11346.1| unnamed protein product [Arabidopsis thaliana]         59   4e-07

>ref|XP_002331697.1| predicted protein [Populus trichocarpa] gi|222874175|gb|EEF11306.1|
           predicted protein [Populus trichocarpa]
          Length = 770

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 28/39 (71%), Positives = 35/39 (89%)
 Frame = +1

Query: 88  MFYSKSMLSKKGPLGNIWVAAYFFRKLKKEQIASTDISS 204
           MFYS  +LS+KGPLG+IWVAAY+F++LKK Q+ STDISS
Sbjct: 1   MFYSHCLLSRKGPLGSIWVAAYYFKRLKKAQVTSTDISS 39


>ref|XP_002509552.1| Sister chromatid cohesion 1 protein, putative [Ricinus communis]
           gi|223549451|gb|EEF50939.1| Sister chromatid cohesion 1
           protein, putative [Ricinus communis]
          Length = 781

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 28/39 (71%), Positives = 32/39 (82%)
 Frame = +1

Query: 88  MFYSKSMLSKKGPLGNIWVAAYFFRKLKKEQIASTDISS 204
           MFYS S LS+KGPLG IWVAAY F+KLKK Q+  TDI+S
Sbjct: 1   MFYSHSFLSRKGPLGAIWVAAYCFKKLKKAQVTQTDIAS 39


>ref|XP_002868626.1| hypothetical protein ARALYDRAFT_493894 [Arabidopsis lyrata subsp.
           lyrata] gi|297314462|gb|EFH44885.1| hypothetical protein
           ARALYDRAFT_493894 [Arabidopsis lyrata subsp. lyrata]
          Length = 805

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 26/39 (66%), Positives = 33/39 (84%)
 Frame = +1

Query: 88  MFYSKSMLSKKGPLGNIWVAAYFFRKLKKEQIASTDISS 204
           MFYS+ ++S+KGPLG IWVAAYFF+KLKK Q+ +T I S
Sbjct: 1   MFYSQCLVSRKGPLGAIWVAAYFFKKLKKAQVKATHIPS 39


>gb|AAG44842.1|AF281154_1 cohesion family protein SYN2 [Arabidopsis thaliana]
          Length = 809

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 26/39 (66%), Positives = 32/39 (82%)
 Frame = +1

Query: 88  MFYSKSMLSKKGPLGNIWVAAYFFRKLKKEQIASTDISS 204
           MFYS  ++S+KGPLG IWVAAYFF+KLKK Q+ +T I S
Sbjct: 1   MFYSHCLVSRKGPLGAIWVAAYFFKKLKKSQVKATHIPS 39


>dbj|BAB11346.1| unnamed protein product [Arabidopsis thaliana]
          Length = 901

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 26/39 (66%), Positives = 32/39 (82%)
 Frame = +1

Query: 88  MFYSKSMLSKKGPLGNIWVAAYFFRKLKKEQIASTDISS 204
           MFYS  ++S+KGPLG IWVAAYFF+KLKK Q+ +T I S
Sbjct: 1   MFYSHCLVSRKGPLGAIWVAAYFFKKLKKSQVKATHIPS 39


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