BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00039090
         (266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534373.1| pentatricopeptide repeat-containing protein,...   128   6e-28
emb|CBI27814.3| unnamed protein product [Vitis vinifera]              122   4e-26
ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containi...   122   4e-26
ref|XP_003597735.1| Pentatricopeptide repeat-containing protein ...    82   3e-14
ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containi...    82   6e-14

>ref|XP_002534373.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223525413|gb|EEF28011.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 207

 Score =  128 bits (321), Expect = 6e-28
 Identities = 60/86 (69%), Positives = 70/86 (81%)
 Frame = +2

Query: 8   ASMLSQSMCYARKLFDALPHPDSFSWNSLIRGYADLGPCTEIPLLYKEMHHRGLSPDHFT 187
           AS LS SM YARKLFD +P  D F WN+LIRGYADLGP  E  +LYK MHH G  PD++T
Sbjct: 68  ASALSSSMDYARKLFDKMPQRDVFLWNTLIRGYADLGPYQEAVMLYKTMHHDGFLPDNYT 127

Query: 188 FPFVVRSCAVLTALQEGKQVHCNVIK 265
           FPFVVRSCAV++AL+EGK+V+CNVIK
Sbjct: 128 FPFVVRSCAVISALKEGKEVYCNVIK 153


>emb|CBI27814.3| unnamed protein product [Vitis vinifera]
          Length = 555

 Score =  122 bits (305), Expect = 4e-26
 Identities = 55/86 (63%), Positives = 67/86 (77%)
 Frame = +2

Query: 8   ASMLSQSMCYARKLFDALPHPDSFSWNSLIRGYADLGPCTEIPLLYKEMHHRGLSPDHFT 187
           A  L+ +M YARK+FD +P  D F WN+LIRGYAD GPC E   LY  MH  GL PD++T
Sbjct: 71  ACCLAPTMDYARKMFDQMPKRDVFLWNTLIRGYADAGPCEEALALYSNMHGAGLFPDNYT 130

Query: 188 FPFVVRSCAVLTALQEGKQVHCNVIK 265
           FPFVVRSCAVL+AL+EGK+VHCN++K
Sbjct: 131 FPFVVRSCAVLSALREGKEVHCNIVK 156


>ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
           [Vitis vinifera]
          Length = 597

 Score =  122 bits (305), Expect = 4e-26
 Identities = 55/86 (63%), Positives = 67/86 (77%)
 Frame = +2

Query: 8   ASMLSQSMCYARKLFDALPHPDSFSWNSLIRGYADLGPCTEIPLLYKEMHHRGLSPDHFT 187
           A  L+ +M YARK+FD +P  D F WN+LIRGYAD GPC E   LY  MH  GL PD++T
Sbjct: 71  ACCLAPTMDYARKMFDQMPKRDVFLWNTLIRGYADAGPCEEALALYSNMHGAGLFPDNYT 130

Query: 188 FPFVVRSCAVLTALQEGKQVHCNVIK 265
           FPFVVRSCAVL+AL+EGK+VHCN++K
Sbjct: 131 FPFVVRSCAVLSALREGKEVHCNIVK 156


>ref|XP_003597735.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|87240430|gb|ABD32288.1| Tetratricopeptide-like
           helical [Medicago truncatula]
           gi|355486783|gb|AES67986.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 620

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 40/83 (48%), Positives = 55/83 (66%)
 Frame = +2

Query: 17  LSQSMCYARKLFDALPHPDSFSWNSLIRGYADLGPCTEIPLLYKEMHHRGLSPDHFTFPF 196
           +S S+  AR LFD +P  + F WN LIRGYA  GP     +LY +M   GL PD+FT PF
Sbjct: 94  VSNSLLNARNLFDKIPKQNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPF 153

Query: 197 VVRSCAVLTALQEGKQVHCNVIK 265
           V+++C+ L+A+ EG+ +H  VIK
Sbjct: 154 VLKACSALSAIGEGRSIHEYVIK 176


>ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 648

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 38/80 (47%), Positives = 55/80 (68%)
 Frame = +2

Query: 26  SMCYARKLFDALPHPDSFSWNSLIRGYADLGPCTEIPLLYKEMHHRGLSPDHFTFPFVVR 205
           S+  AR LFD +P  + F WN LIRGYA  GP      LY +M   GL PD+FTFPFV++
Sbjct: 125 SLSSARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLK 184

Query: 206 SCAVLTALQEGKQVHCNVIK 265
           +CA L+A++ G+++H +V++
Sbjct: 185 ACAALSAIEHGREIHEHVVQ 204