BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00039068
         (397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29027.3| unnamed protein product [Vitis vinifera]              181   4e-44
ref|XP_002270476.1| PREDICTED: pentatricopeptide repeat-containi...   181   4e-44
ref|XP_002515972.1| pentatricopeptide repeat-containing protein,...   181   7e-44
ref|XP_002310070.1| predicted protein [Populus trichocarpa] gi|2...   177   8e-43
emb|CAN75501.1| hypothetical protein VITISV_034156 [Vitis vinifera]   176   2e-42

>emb|CBI29027.3| unnamed protein product [Vitis vinifera]
          Length = 384

 Score =  181 bits (460), Expect = 4e-44
 Identities = 89/131 (67%), Positives = 104/131 (79%)
 Frame = -3

Query: 395 VFDAMCVRNLVSWNTMVDGYAKCGDLVAARNVFDGMPVRDVVSWSALIDGYVKGGEFREA 216
           VFD M +RN VSWN M+DGYAKCGDL +AR VF+ MP RDVVSWS++IDG VKGGE+  A
Sbjct: 14  VFDEMLIRNSVSWNAMLDGYAKCGDLDSARQVFESMPDRDVVSWSSMIDGCVKGGEYGVA 73

Query: 215 LAVFASMCDDGMKVNAVTMVSVLCACAHLGALDQGRRMHRYIKDNGVCLTLQLSTSLVDM 36
           LA+F  M   G K N VTMVSVLCACAHLGAL+QGR MH+Y+ DN +  TL L TSL+DM
Sbjct: 74  LAIFERMRVVGPKANEVTMVSVLCACAHLGALEQGRTMHQYMVDNTMRFTLVLRTSLMDM 133

Query: 35  YAKCGSITEAL 3
           YAKCG+I EA+
Sbjct: 134 YAKCGAIEEAI 144



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 36/123 (29%), Positives = 63/123 (51%), Gaps = 2/123 (1%)
 Frame = -3

Query: 368 LVSWNTMVDGYAKCGDLVAARNVFDGMPV--RDVVSWSALIDGYVKGGEFREALAVFASM 195
           LV   +++D YAKCG +  A  VF G+P+   DV+ W+ +I G    G   E+L +F  M
Sbjct: 124 LVLRTSLMDMYAKCGAIEEAIAVFRGVPMDQTDVLMWNTIIGGLATHGLVHESLELFKEM 183

Query: 194 CDDGMKVNAVTMVSVLCACAHLGALDQGRRMHRYIKDNGVCLTLQLSTSLVDMYAKCGSI 15
              G+  + +T + +  ACAH G + +     + +   G+    +    +VD+ ++ G +
Sbjct: 184 QVLGIVPDEITYLCLFSACAHGGLVHEAWHFFKSLGKQGMVPKSEHYACMVDVLSRAGQL 243

Query: 14  TEA 6
            EA
Sbjct: 244 AEA 246


>ref|XP_002270476.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g08305-like [Vitis vinifera]
          Length = 539

 Score =  181 bits (460), Expect = 4e-44
 Identities = 89/131 (67%), Positives = 104/131 (79%)
 Frame = -3

Query: 395 VFDAMCVRNLVSWNTMVDGYAKCGDLVAARNVFDGMPVRDVVSWSALIDGYVKGGEFREA 216
           VFD M +RN VSWN M+DGYAKCGDL +AR VF+ MP RDVVSWS++IDG VKGGE+  A
Sbjct: 169 VFDEMLIRNSVSWNAMLDGYAKCGDLDSARQVFESMPDRDVVSWSSMIDGCVKGGEYGVA 228

Query: 215 LAVFASMCDDGMKVNAVTMVSVLCACAHLGALDQGRRMHRYIKDNGVCLTLQLSTSLVDM 36
           LA+F  M   G K N VTMVSVLCACAHLGAL+QGR MH+Y+ DN +  TL L TSL+DM
Sbjct: 229 LAIFERMRVVGPKANEVTMVSVLCACAHLGALEQGRTMHQYMVDNTMRFTLVLRTSLMDM 288

Query: 35  YAKCGSITEAL 3
           YAKCG+I EA+
Sbjct: 289 YAKCGAIEEAI 299



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 36/123 (29%), Positives = 63/123 (51%), Gaps = 2/123 (1%)
 Frame = -3

Query: 368 LVSWNTMVDGYAKCGDLVAARNVFDGMPV--RDVVSWSALIDGYVKGGEFREALAVFASM 195
           LV   +++D YAKCG +  A  VF G+P+   DV+ W+ +I G    G   E+L +F  M
Sbjct: 279 LVLRTSLMDMYAKCGAIEEAIAVFRGVPMDQTDVLMWNTIIGGLATHGLVHESLELFKEM 338

Query: 194 CDDGMKVNAVTMVSVLCACAHLGALDQGRRMHRYIKDNGVCLTLQLSTSLVDMYAKCGSI 15
              G+  + +T + +  ACAH G + +     + +   G+    +    +VD+ ++ G +
Sbjct: 339 QVLGIVPDEITYLCLFSACAHGGLVHEAWHFFKSLGKQGMVPKSEHYACMVDVLSRAGQL 398

Query: 14  TEA 6
            EA
Sbjct: 399 AEA 401


>ref|XP_002515972.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223544877|gb|EEF46392.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 546

 Score =  181 bits (458), Expect = 7e-44
 Identities = 89/130 (68%), Positives = 104/130 (80%)
 Frame = -3

Query: 395 VFDAMCVRNLVSWNTMVDGYAKCGDLVAARNVFDGMPVRDVVSWSALIDGYVKGGEFREA 216
           VFD M V+NLVSWN+MVDG AKCG++V AR +FD MP RDV+SWS+LIDGYVK G++ +A
Sbjct: 171 VFDGMPVKNLVSWNSMVDGSAKCGNMVLARQLFDLMPDRDVLSWSSLIDGYVKNGDYGDA 230

Query: 215 LAVFASMCDDGMKVNAVTMVSVLCACAHLGALDQGRRMHRYIKDNGVCLTLQLSTSLVDM 36
           + VF  M   G K N VTMVSVLCACAHLGALD+GR MH Y+ DN + LTL L TSLVDM
Sbjct: 231 MVVFDKMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNKLPLTLVLCTSLVDM 290

Query: 35  YAKCGSITEA 6
           YAKCG+I EA
Sbjct: 291 YAKCGAINEA 300



 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 45/132 (34%), Positives = 72/132 (54%), Gaps = 2/132 (1%)
 Frame = -3

Query: 395 VFDAMCVRNLVSWNTMVDGYAKCGDLVAARNVFDGMPVR--DVVSWSALIDGYVKGGEFR 222
           V D      LV   ++VD YAKCG +  A +VF G+P    DV+ W+A+I G    G  +
Sbjct: 272 VIDNKLPLTLVLCTSLVDMYAKCGAINEAFDVFRGIPAELSDVLLWNAMIGGLATHGLVK 331

Query: 221 EALAVFASMCDDGMKVNAVTMVSVLCACAHLGALDQGRRMHRYIKDNGVCLTLQLSTSLV 42
           E+L +F  M   G+K + +T +S+L ACAH G + +       +  +G+ L ++    +V
Sbjct: 332 ESLDLFKEMNFVGVKPDEITYLSLLHACAHGGLVKEAWYFFDCLGKHGMTLKIEHYACIV 391

Query: 41  DMYAKCGSITEA 6
           D+ A+ G I +A
Sbjct: 392 DVMARAGQIAKA 403


>ref|XP_002310070.1| predicted protein [Populus trichocarpa] gi|222852973|gb|EEE90520.1|
           predicted protein [Populus trichocarpa]
          Length = 438

 Score =  177 bits (449), Expect = 8e-43
 Identities = 87/130 (66%), Positives = 99/130 (76%)
 Frame = -3

Query: 395 VFDAMCVRNLVSWNTMVDGYAKCGDLVAARNVFDGMPVRDVVSWSALIDGYVKGGEFREA 216
           VFD   V+NLVSWN+MVDGYAKCG L  AR +FD MP RDV SWS LIDGY K G + +A
Sbjct: 67  VFDGTPVKNLVSWNSMVDGYAKCGYLDLARGLFDLMPERDVRSWSCLIDGYAKSGNYGDA 126

Query: 215 LAVFASMCDDGMKVNAVTMVSVLCACAHLGALDQGRRMHRYIKDNGVCLTLQLSTSLVDM 36
           +AVF  M   G K N VTMVSVLCACAHLGALD+GR MH+Y+ DNG  L L L TSL+DM
Sbjct: 127 MAVFEKMRTSGPKANEVTMVSVLCACAHLGALDKGRMMHQYLVDNGFELNLVLRTSLIDM 186

Query: 35  YAKCGSITEA 6
           YAKCG++ EA
Sbjct: 187 YAKCGAVEEA 196



 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 42/124 (33%), Positives = 69/124 (55%), Gaps = 2/124 (1%)
 Frame = -3

Query: 371 NLVSWNTMVDGYAKCGDLVAARNVFDGMPVR--DVVSWSALIDGYVKGGEFREALAVFAS 198
           NLV   +++D YAKCG +  A  VF G+ +R  DV+ W+A+I G    G  +E+L ++  
Sbjct: 176 NLVLRTSLIDMYAKCGAVEEAFAVFRGVSLRKSDVLIWNAMIGGLATHGLVKESLDLYTE 235

Query: 197 MCDDGMKVNAVTMVSVLCACAHLGALDQGRRMHRYIKDNGVCLTLQLSTSLVDMYAKCGS 18
           M   G+K + +T + +L ACAH G + Q   +   +  NG+    +    +VD+ A+ G 
Sbjct: 236 MQIAGIKPDEITFLCLLSACAHGGLVKQASYVFEGLGKNGMTPKTEHYACMVDVMARAGQ 295

Query: 17  ITEA 6
           + EA
Sbjct: 296 VAEA 299


>emb|CAN75501.1| hypothetical protein VITISV_034156 [Vitis vinifera]
          Length = 532

 Score =  176 bits (446), Expect = 2e-42
 Identities = 87/131 (66%), Positives = 101/131 (77%)
 Frame = -3

Query: 395 VFDAMCVRNLVSWNTMVDGYAKCGDLVAARNVFDGMPVRDVVSWSALIDGYVKGGEFREA 216
           VFD M +RN VSWN M+DGYAKCGDL +A  VF  MP RDVVSWS++IDG VKGGE+  A
Sbjct: 162 VFDEMLIRNSVSWNAMLDGYAKCGDLDSAHQVFXSMPDRDVVSWSSMIDGCVKGGEYGVA 221

Query: 215 LAVFASMCDDGMKVNAVTMVSVLCACAHLGALDQGRRMHRYIKDNGVCLTLQLSTSLVDM 36
           LA+F  M   G K N VTMVSVLCACAHLGAL+ GR MH+Y+ DN +  TL L TSL+DM
Sbjct: 222 LAIFERMRVVGPKANXVTMVSVLCACAHLGALEXGRXMHQYMVDNTMRFTLVLRTSLMDM 281

Query: 35  YAKCGSITEAL 3
           YAKCG+I EA+
Sbjct: 282 YAKCGAIEEAI 292



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 36/123 (29%), Positives = 63/123 (51%), Gaps = 2/123 (1%)
 Frame = -3

Query: 368 LVSWNTMVDGYAKCGDLVAARNVFDGMPV--RDVVSWSALIDGYVKGGEFREALAVFASM 195
           LV   +++D YAKCG +  A  VF G+P+   DV+ W+ +I G    G   E+L +F  M
Sbjct: 272 LVLRTSLMDMYAKCGAIEEAIAVFRGVPMDQTDVLMWNTIIGGLATHGLVXESLELFKEM 331

Query: 194 CDDGMKVNAVTMVSVLCACAHLGALDQGRRMHRYIKDNGVCLTLQLSTSLVDMYAKCGSI 15
              G+  + +T + +  ACAH G + +     + +   G+    +    +VD+ ++ G +
Sbjct: 332 QVLGIVPDEITYLCLFSACAHGGLVHEAWHFFKSLGKQGMVPKSEHYACMVDVLSRAGQL 391

Query: 14  TEA 6
            EA
Sbjct: 392 AEA 394