BLASTX nr result
ID: Dioscorea21_contig00039039
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00039039
(306 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_190263.1| pentatricopeptide repeat-containing protein [Ar... 113 1e-23
ref|XP_002282803.1| PREDICTED: pentatricopeptide repeat-containi... 112 3e-23
ref|XP_002526448.1| pentatricopeptide repeat-containing protein,... 112 3e-23
emb|CAN74403.1| hypothetical protein VITISV_043633 [Vitis vinifera] 112 3e-23
ref|XP_002877513.1| hypothetical protein ARALYDRAFT_905886 [Arab... 111 7e-23
>ref|NP_190263.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207666|sp|Q9STF3.1|PP265_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g46790, chloroplastic; AltName: Full=Protein
CHLORORESPIRATORY REDUCTION 2; Flags: Precursor
gi|5541680|emb|CAB51186.1| putative protein [Arabidopsis
thaliana] gi|110741961|dbj|BAE98921.1| hypothetical
protein [Arabidopsis thaliana]
gi|332644684|gb|AEE78205.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 657
Score = 113 bits (283), Expect = 1e-23
Identities = 53/102 (51%), Positives = 75/102 (73%)
Frame = -1
Query: 306 LPSCAEIADLQQGKCLHGYIIRRGLDFTSDISVGNALLTMYAKCGCIRIAVKIFDTLTRR 127
L +CA +A L+QGK +HGYI+RRGLD S + V +AL+TMY +CG + + ++FD + R
Sbjct: 292 LQACASLAALEQGKLIHGYILRRGLD--SILPVISALVTMYGRCGKLEVGQRVFDRMHDR 349
Query: 126 DIVSWNAMIAAYGMHGCGVDALQIFYRMLESGERPTSVTFTS 1
D+VSWN++I++YG+HG G A+QIF ML +G PT VTF S
Sbjct: 350 DVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVS 391
Score = 66.2 bits (160), Expect = 3e-09
Identities = 35/95 (36%), Positives = 55/95 (57%), Gaps = 2/95 (2%)
Frame = -1
Query: 279 LQQGKCLHGYIIRRGLDFTSDISVGNALLTMYAKCGCIRIAVKIFDTLTRRDIVSWNAMI 100
L +GK +H ++ RRG ++S + + L+ MYA+ GC+ A +F + R++VSW+AMI
Sbjct: 198 LMKGKEIHAHLTRRG--YSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMI 255
Query: 99 AAYGMHGCGVDALQIFYRMLE--SGERPTSVTFTS 1
A Y +G +AL+ F M+ P SVT S
Sbjct: 256 ACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVS 290
>ref|XP_002282803.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g40720-like [Vitis vinifera]
Length = 854
Score = 112 bits (280), Expect = 3e-23
Identities = 54/102 (52%), Positives = 69/102 (67%)
Frame = -1
Query: 306 LPSCAEIADLQQGKCLHGYIIRRGLDFTSDISVGNALLTMYAKCGCIRIAVKIFDTLTRR 127
L S +A L QG+ LH Y+ RRG D+S+ NA +TMYA+CG ++ A IF TL +R
Sbjct: 565 LSSFTHLATLPQGQSLHAYVTRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTLPKR 624
Query: 126 DIVSWNAMIAAYGMHGCGVDALQIFYRMLESGERPTSVTFTS 1
+I+SWNAMIA YGM+G G DA+ F +MLE G RP VTF S
Sbjct: 625 NIISWNAMIAGYGMNGRGSDAMLAFSQMLEDGFRPNGVTFVS 666
Score = 78.2 bits (191), Expect = 6e-13
Identities = 43/103 (41%), Positives = 59/103 (57%), Gaps = 1/103 (0%)
Frame = -1
Query: 306 LPSCAEIAD-LQQGKCLHGYIIRRGLDFTSDISVGNALLTMYAKCGCIRIAVKIFDTLTR 130
L C E+A L +GK LH ++I+ G+ D S+GNALL+MY + C+ KIFD +
Sbjct: 363 LSMCEELASGLLKGKSLHAHVIKSGMRI--DASLGNALLSMYTELNCVESVQKIFDRMKG 420
Query: 129 RDIVSWNAMIAAYGMHGCGVDALQIFYRMLESGERPTSVTFTS 1
DI+SWN MI A + A ++F RM ES +P S T S
Sbjct: 421 VDIISWNTMILALARNTLRAQACELFERMRESEIKPNSYTIIS 463
Score = 70.1 bits (170), Expect = 2e-10
Identities = 33/90 (36%), Positives = 54/90 (60%)
Frame = -1
Query: 300 SCAEIADLQQGKCLHGYIIRRGLDFTSDISVGNALLTMYAKCGCIRIAVKIFDTLTRRDI 121
+CAE+ L+ GK +H I+ +F D+ + NALL MY+ G + + ++F+++ RD
Sbjct: 264 ACAELGSLKLGKQIHQLAIK--FEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNRDA 321
Query: 120 VSWNAMIAAYGMHGCGVDALQIFYRMLESG 31
WN+MI+AY GC +A+ +F RM G
Sbjct: 322 PLWNSMISAYAAFGCHEEAMDLFIRMQSEG 351
Score = 68.9 bits (167), Expect = 4e-10
Identities = 36/102 (35%), Positives = 55/102 (53%)
Frame = -1
Query: 306 LPSCAEIADLQQGKCLHGYIIRRGLDFTSDISVGNALLTMYAKCGCIRIAVKIFDTLTRR 127
L +CA +++GK +H I +G D D+ VG A++ Y KCG + A +FD ++ R
Sbjct: 60 LKACAAQNAVERGKSIHRSI--QGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDR 117
Query: 126 DIVSWNAMIAAYGMHGCGVDALQIFYRMLESGERPTSVTFTS 1
D+V WNAM+ Y GC +A+ + M RP S T +
Sbjct: 118 DVVLWNAMVYGYVGWGCYEEAMLLVREMGRENLRPNSRTMVA 159
Score = 67.4 bits (163), Expect = 1e-09
Identities = 35/99 (35%), Positives = 55/99 (55%)
Frame = -1
Query: 306 LPSCAEIADLQQGKCLHGYIIRRGLDFTSDISVGNALLTMYAKCGCIRIAVKIFDTLTRR 127
L +C ++ L G+ +HGY+++ ++ + AL MY CG A +F+ R
Sbjct: 465 LAACEDVTCLDFGRSIHGYVMKHSIEINQPLRT--ALADMYMNCGDEATARDLFEGCPDR 522
Query: 126 DIVSWNAMIAAYGMHGCGVDALQIFYRMLESGERPTSVT 10
D++SWNAMIA+Y + AL +F+RM+ E P SVT
Sbjct: 523 DLISWNAMIASYVKNNQAHKALLLFHRMISEAE-PNSVT 560
Score = 58.9 bits (141), Expect = 4e-07
Identities = 34/89 (38%), Positives = 54/89 (60%)
Frame = -1
Query: 306 LPSCAEIADLQQGKCLHGYIIRRGLDFTSDISVGNALLTMYAKCGCIRIAVKIFDTLTRR 127
L +C ++L+ G+ +HGY +R G+ F S+ V AL+ Y + +R+ +FD + R
Sbjct: 161 LLACEGASELRLGRGVHGYCLRNGM-FDSNPHVATALIGFYLRFD-MRVLPLLFDLMVVR 218
Query: 126 DIVSWNAMIAAYGMHGCGVDALQIFYRML 40
+IVSWNAMI+ Y G AL++F +ML
Sbjct: 219 NIVSWNAMISGYYDVGDYFKALELFVQML 247
>ref|XP_002526448.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223534228|gb|EEF35943.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 557
Score = 112 bits (280), Expect = 3e-23
Identities = 55/100 (55%), Positives = 69/100 (69%)
Frame = -1
Query: 306 LPSCAEIADLQQGKCLHGYIIRRGLDFTSDISVGNALLTMYAKCGCIRIAVKIFDTLTRR 127
LP+CA +A LQ G C H Y + +G FTS+I++ NAL+ MYAKCG I A +FD + +R
Sbjct: 434 LPACAHLAALQHGSCCHSYALIKG--FTSEITICNALIDMYAKCGRIDTARNVFDRMHKR 491
Query: 126 DIVSWNAMIAAYGMHGCGVDALQIFYRMLESGERPTSVTF 7
DIVSWNAMI AYG HG G++AL +F ML G P VTF
Sbjct: 492 DIVSWNAMIIAYGNHGLGMEALLLFDNMLADGLEPDDVTF 531
Score = 80.9 bits (198), Expect = 1e-13
Identities = 40/99 (40%), Positives = 63/99 (63%)
Frame = -1
Query: 306 LPSCAEIADLQQGKCLHGYIIRRGLDFTSDISVGNALLTMYAKCGCIRIAVKIFDTLTRR 127
L +CAE+ D+ +G+C+H Y I+ G F SD+ +GN LL+ YAKCG + A++ F + +
Sbjct: 333 LRACAELTDVSRGRCIHCYTIKSG--FISDLMLGNTLLSTYAKCGTVSDAIRYFHEMELK 390
Query: 126 DIVSWNAMIAAYGMHGCGVDALQIFYRMLESGERPTSVT 10
D VS++A+I+ +G +AL +F+RM SG P T
Sbjct: 391 DEVSYSAIISGCMQNGNAKEALSMFHRMRLSGMDPELAT 429
Score = 73.9 bits (180), Expect = 1e-11
Identities = 37/103 (35%), Positives = 62/103 (60%), Gaps = 1/103 (0%)
Frame = -1
Query: 306 LPSCAEIADLQQGKCLHGYIIRRGLDFTSDISVGNALLTMYAKCGCIRIAVKIFDTLTRR 127
L +C+ + +++GK +H I + LD SD+ V A++ MYAKCGC+ A +F + R
Sbjct: 125 LKACSALQAIEEGKEIH--IHAKRLDLDSDVYVSTAVVDMYAKCGCLDDAEMVFSGMPYR 182
Query: 126 DIVSWNAMIAAYGMHG-CGVDALQIFYRMLESGERPTSVTFTS 1
D+V+WN+MIA + +H C + +Q+ +M + RP S T +
Sbjct: 183 DVVAWNSMIAGFSLHRVCYNETIQLLAQMQKDLVRPNSSTIVA 225
Score = 68.2 bits (165), Expect = 7e-10
Identities = 41/107 (38%), Positives = 59/107 (55%), Gaps = 5/107 (4%)
Frame = -1
Query: 306 LPSCAEIADLQQGKCLHGYIIRRGLDFTSDISVGNALLTMYAKCGCIRIAVKIFDTLT-R 130
LP+ A+ L GK LHG+ +RRG + D+ V LL MY KC CI A FD ++
Sbjct: 227 LPAVAQANALSHGKALHGFCVRRG--YIDDVVVATGLLDMYGKCQCIIYARNFFDMMSIV 284
Query: 129 RDIVSWNAMIAAYGMHGCGVDALQIFYRMLE----SGERPTSVTFTS 1
R+ V+W+AM+ AY M +AL +F M+ + + PT VT +
Sbjct: 285 RNEVTWSAMLGAYVMCELMREALDLFQYMMRIKDAAVKSPTEVTLAT 331
>emb|CAN74403.1| hypothetical protein VITISV_043633 [Vitis vinifera]
Length = 841
Score = 112 bits (280), Expect = 3e-23
Identities = 54/102 (52%), Positives = 69/102 (67%)
Frame = -1
Query: 306 LPSCAEIADLQQGKCLHGYIIRRGLDFTSDISVGNALLTMYAKCGCIRIAVKIFDTLTRR 127
L S +A L QG+ LH Y+ RRG D+S+ NA +TMYA+CG ++ A IF TL +R
Sbjct: 552 LSSFTHLATLPQGQSLHAYVTRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTLPKR 611
Query: 126 DIVSWNAMIAAYGMHGCGVDALQIFYRMLESGERPTSVTFTS 1
+I+SWNAMIA YGM+G G DA+ F +MLE G RP VTF S
Sbjct: 612 NIISWNAMIAGYGMNGRGSDAMLAFSQMLEDGFRPNGVTFVS 653
Score = 78.2 bits (191), Expect = 6e-13
Identities = 43/103 (41%), Positives = 59/103 (57%), Gaps = 1/103 (0%)
Frame = -1
Query: 306 LPSCAEIAD-LQQGKCLHGYIIRRGLDFTSDISVGNALLTMYAKCGCIRIAVKIFDTLTR 130
L C E+A L +GK LH ++I+ G+ D S+GNALL+MY + C+ KIFD +
Sbjct: 370 LSMCEELASGLLKGKSLHAHVIKSGMRI--DASLGNALLSMYTELNCVESVQKIFDRMKG 427
Query: 129 RDIVSWNAMIAAYGMHGCGVDALQIFYRMLESGERPTSVTFTS 1
DI+SWN MI A + A ++F RM ES +P S T S
Sbjct: 428 VDIISWNTMILALARNTLRAQACELFERMRESEIKPNSYTIIS 470
Score = 70.1 bits (170), Expect = 2e-10
Identities = 33/90 (36%), Positives = 54/90 (60%)
Frame = -1
Query: 300 SCAEIADLQQGKCLHGYIIRRGLDFTSDISVGNALLTMYAKCGCIRIAVKIFDTLTRRDI 121
+CAE+ L+ GK +H I+ +F D+ + NALL MY+ G + + ++F+++ RD
Sbjct: 271 ACAELGSLKLGKQIHQLAIK--FEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNRDA 328
Query: 120 VSWNAMIAAYGMHGCGVDALQIFYRMLESG 31
WN+MI+AY GC +A+ +F RM G
Sbjct: 329 PLWNSMISAYAAFGCHEEAMDLFIRMQSEG 358
Score = 68.9 bits (167), Expect = 4e-10
Identities = 36/102 (35%), Positives = 55/102 (53%)
Frame = -1
Query: 306 LPSCAEIADLQQGKCLHGYIIRRGLDFTSDISVGNALLTMYAKCGCIRIAVKIFDTLTRR 127
L +CA +++GK +H I +G D D+ VG A++ Y KCG + A +FD ++ R
Sbjct: 67 LKACAAQNAVERGKSIHRSI--QGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDR 124
Query: 126 DIVSWNAMIAAYGMHGCGVDALQIFYRMLESGERPTSVTFTS 1
D+V WNAM+ Y GC +A+ + M RP S T +
Sbjct: 125 DVVLWNAMVYGYVGWGCYEEAMLLVREMGRENLRPNSRTMVA 166
Score = 58.9 bits (141), Expect = 4e-07
Identities = 34/89 (38%), Positives = 54/89 (60%)
Frame = -1
Query: 306 LPSCAEIADLQQGKCLHGYIIRRGLDFTSDISVGNALLTMYAKCGCIRIAVKIFDTLTRR 127
L +C ++L+ G+ +HGY +R G+ F S+ V AL+ Y + +R+ +FD + R
Sbjct: 168 LLACEGASELRLGRGVHGYCLRNGM-FDSNPHVATALIGFYLRFD-MRVLPLLFDLMVVR 225
Query: 126 DIVSWNAMIAAYGMHGCGVDALQIFYRML 40
+IVSWNAMI+ Y G AL++F +ML
Sbjct: 226 NIVSWNAMISGYYDVGDYFKALELFVQML 254
>ref|XP_002877513.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
lyrata] gi|297323351|gb|EFH53772.1| hypothetical protein
ARALYDRAFT_905886 [Arabidopsis lyrata subsp. lyrata]
Length = 657
Score = 111 bits (277), Expect = 7e-23
Identities = 52/102 (50%), Positives = 75/102 (73%)
Frame = -1
Query: 306 LPSCAEIADLQQGKCLHGYIIRRGLDFTSDISVGNALLTMYAKCGCIRIAVKIFDTLTRR 127
L +CA +A L+QG+ +HGYI+RRGLD S + V +AL+TMY +CG + + ++FD + R
Sbjct: 292 LQACASLAALEQGRLIHGYILRRGLD--SILPVISALVTMYGRCGKLDVGQRVFDRMHDR 349
Query: 126 DIVSWNAMIAAYGMHGCGVDALQIFYRMLESGERPTSVTFTS 1
D+VSWN++I++YG+HG G A+QIF ML +G PT VTF S
Sbjct: 350 DVVSWNSLISSYGVHGYGRKAIQIFEEMLANGASPTPVTFVS 391
Score = 65.9 bits (159), Expect = 3e-09
Identities = 35/95 (36%), Positives = 55/95 (57%), Gaps = 2/95 (2%)
Frame = -1
Query: 279 LQQGKCLHGYIIRRGLDFTSDISVGNALLTMYAKCGCIRIAVKIFDTLTRRDIVSWNAMI 100
L +GK +H ++ RRG + S + + L+ MYA+ GC+ A +F+ + R++VSW+AMI
Sbjct: 198 LTKGKEIHAHLTRRG--YNSHVYIMTTLVDMYARFGCVDYASYVFNGMPVRNVVSWSAMI 255
Query: 99 AAYGMHGCGVDALQIFYRML--ESGERPTSVTFTS 1
A Y +G +AL+ F M+ P SVT S
Sbjct: 256 ACYAKNGKAFEALRTFREMMTETKDSSPNSVTMVS 290