BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00039022
         (517 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264956.1| PREDICTED: pentatricopeptide repeat-containi...   156   2e-36
ref|XP_002305605.1| predicted protein [Populus trichocarpa] gi|2...   125   4e-27
sp|O49558.2|PP331_ARATH RecName: Full=Pentatricopeptide repeat-c...   123   2e-26
ref|XP_002518527.1| pentatricopeptide repeat-containing protein,...   115   3e-24
ref|NP_193849.2| pentatricopeptide repeat-containing protein [Ar...   104   8e-21

>ref|XP_002264956.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21170-like [Vitis vinifera]
          Length = 569

 Score =  156 bits (394), Expect = 2e-36
 Identities = 74/139 (53%), Positives = 100/139 (71%)
 Frame = -3

Query: 515 CGEGWWIEAGDLWNAAMEKSILLNAHCSNSLLEHYCCEGLVDSAMLLHEKIMKLGGCLDA 336
           C  G W EA DL N  +EK +L ++ C ++L+EHYC    +DS++ LHEKI K+ G LD 
Sbjct: 430 CKNGRWTEADDLLNVTIEKGLLPDSFCCSALVEHYCRSRQIDSSIALHEKIKKVKGSLDV 489

Query: 335 IAYNSLLRIVLVQRKIEAASRVFDYMRERNVLSSSSYVIMISAFCREKEMRKAMELHDEM 156
             YN LL  + ++++IE A  VFD MR +N+LSS+S+ IM+S  CRE+E+RKAM+ HDEM
Sbjct: 490 ATYNVLLNGLFMEKRIEDAVSVFDCMRSQNLLSSTSFTIMVSGLCRERELRKAMKFHDEM 549

Query: 155 LKVGLKPDDSIYKHLISGF 99
           LK+GLKPD + YK LISGF
Sbjct: 550 LKMGLKPDRATYKRLISGF 568


>ref|XP_002305605.1| predicted protein [Populus trichocarpa] gi|222848569|gb|EEE86116.1|
           predicted protein [Populus trichocarpa]
          Length = 564

 Score =  125 bits (314), Expect = 4e-27
 Identities = 64/134 (47%), Positives = 84/134 (62%)
 Frame = -3

Query: 500 WIEAGDLWNAAMEKSILLNAHCSNSLLEHYCCEGLVDSAMLLHEKIMKLGGCLDAIAYNS 321
           W E  DL +  +EK +L ++ C  SL+EHYC    +D A+ LH K+ KL   LD   YN 
Sbjct: 429 WREVEDLLDLVLEKGLLPDSLCCCSLVEHYCSRRQIDKAVALHNKMEKLQASLDVATYNI 488

Query: 320 LLRIVLVQRKIEAASRVFDYMRERNVLSSSSYVIMISAFCREKEMRKAMELHDEMLKVGL 141
           LL  ++   +IE   RVFDYM+   +++S S+ I I   CR KEMRKAM+LHDEML +GL
Sbjct: 489 LLDGLVKNGRIEEVVRVFDYMKGLKLVNSESFTITIRGLCRAKEMRKAMKLHDEMLDMGL 548

Query: 140 KPDDSIYKHLISGF 99
           KPD + YK LI  F
Sbjct: 549 KPDKAAYKRLILEF 562


>sp|O49558.2|PP331_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21170
          Length = 585

 Score =  123 bits (308), Expect = 2e-26
 Identities = 63/141 (44%), Positives = 91/141 (64%), Gaps = 2/141 (1%)
 Frame = -3

Query: 515 CGEGWWIEAGDLWNAAMEKSILLNAHCSNSLLEHYCCEGLVDSAMLLHEKIMKLGGCLDA 336
           C +  W  A  L ++ ME  +  ++     L+E YC  G ++ A++LHEKI K+ G LD 
Sbjct: 444 CRKRRWKSAEKLLDSVMEMEVYFDSFACGLLMERYCRSGKLEKALVLHEKIKKMKGSLDV 503

Query: 335 IAYNSLLRIVLVQRK--IEAASRVFDYMRERNVLSSSSYVIMISAFCREKEMRKAMELHD 162
            AYN++L  +++++K  +E A  VF+YM+E N ++S S+ IMI   CR KEM+KAM  HD
Sbjct: 504 NAYNAVLDRLMMRQKEMVEEAVVVFEYMKEINSVNSKSFTIMIQGLCRVKEMKKAMRSHD 563

Query: 161 EMLKVGLKPDDSIYKHLISGF 99
           EML++GLKPD   YK LI GF
Sbjct: 564 EMLRLGLKPDLVTYKRLILGF 584


>ref|XP_002518527.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542372|gb|EEF43914.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 599

 Score =  115 bits (289), Expect = 3e-24
 Identities = 59/139 (42%), Positives = 85/139 (61%)
 Frame = -3

Query: 515 CGEGWWIEAGDLWNAAMEKSILLNAHCSNSLLEHYCCEGLVDSAMLLHEKIMKLGGCLDA 336
           C +  W EA +L    +EK +L +     SL++HYC     D A+ LH  + KL   LD 
Sbjct: 453 CKKRRWKEAEELLYMVLEKGLLPDTLSFCSLVKHYCSSKQTDKALALHNTLEKLQASLDI 512

Query: 335 IAYNSLLRIVLVQRKIEAASRVFDYMRERNVLSSSSYVIMISAFCREKEMRKAMELHDEM 156
            AYN LL  ++ + ++E + +VFDYM+   + +S+S+ ++I   CR KE+RKAM+LHDEM
Sbjct: 513 TAYNLLLGGLVKEGRVEESIKVFDYMKGLKLANSASFTVIIRGLCRAKELRKAMKLHDEM 572

Query: 155 LKVGLKPDDSIYKHLISGF 99
           L +GLKPD   YK LI  F
Sbjct: 573 LNMGLKPDKPTYKRLILEF 591


>ref|NP_193849.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|332659015|gb|AEE84415.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 551

 Score =  104 bits (259), Expect = 8e-21
 Identities = 53/103 (51%), Positives = 74/103 (71%), Gaps = 2/103 (1%)
 Frame = -3

Query: 401 GLVDSAMLLHEKIMKLGGCLDAIAYNSLLRIVLVQRK--IEAASRVFDYMRERNVLSSSS 228
           G ++ A++LHEKI K+ G LD  AYN++L  +++++K  +E A  VF+YM+E N ++S S
Sbjct: 448 GKLEKALVLHEKIKKMKGSLDVNAYNAVLDRLMMRQKEMVEEAVVVFEYMKEINSVNSKS 507

Query: 227 YVIMISAFCREKEMRKAMELHDEMLKVGLKPDDSIYKHLISGF 99
           + IMI   CR KEM+KAM  HDEML++GLKPD   YK LI GF
Sbjct: 508 FTIMIQGLCRVKEMKKAMRSHDEMLRLGLKPDLVTYKRLILGF 550