BLASTX nr result

ID: Dioscorea21_contig00039012 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00039012
         (259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tpg|DAA53155.1| TPA: MUS2 protein [Zea mays]                           99   4e-19
emb|CAB42555.1| MUS2 protein [Zea mays]                                99   4e-19
emb|CAB42556.1| MUS2 protein [Zea mays]                                99   4e-19
ref|XP_003569902.1| PREDICTED: DNA mismatch repair protein Msh6-...    98   6e-19
ref|XP_002455059.1| hypothetical protein SORBIDRAFT_03g003700 [S...    98   8e-19

>tpg|DAA53155.1| TPA: MUS2 protein [Zea mays]
          Length = 1184

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 46/84 (54%), Positives = 63/84 (75%)
 Frame = +1

Query: 7   FGDAGSTRTQLTPVTLGPEFLDASSVRKSIHSKGFFKGSSKPWSSAFDFTADPDLVLCAL 186
           +  AGS + QLTP++ G +F DA+ +R  IHSKGFF  S++ W SA D T + D+V+CAL
Sbjct: 559 YASAGSVKMQLTPLS-GIDFSDAAQIRNLIHSKGFFNASTESWLSALDCTMNQDVVICAL 617

Query: 187 GGLLGHMCRMMLGDALRNGELLSY 258
           GGL+GH+ R+ML DAL+NGE+L Y
Sbjct: 618 GGLIGHLTRLMLHDALKNGEVLPY 641


>emb|CAB42555.1| MUS2 protein [Zea mays]
          Length = 1184

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 46/84 (54%), Positives = 63/84 (75%)
 Frame = +1

Query: 7   FGDAGSTRTQLTPVTLGPEFLDASSVRKSIHSKGFFKGSSKPWSSAFDFTADPDLVLCAL 186
           +  AGS + QLTP++ G +F DA+ +R  IHSKGFF  S++ W SA D T + D+V+CAL
Sbjct: 559 YASAGSVKMQLTPLS-GIDFSDAAQIRNLIHSKGFFNASTESWLSALDCTMNQDVVICAL 617

Query: 187 GGLLGHMCRMMLGDALRNGELLSY 258
           GGL+GH+ R+ML DAL+NGE+L Y
Sbjct: 618 GGLIGHLTRLMLHDALKNGEVLPY 641


>emb|CAB42556.1| MUS2 protein [Zea mays]
          Length = 877

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 46/84 (54%), Positives = 63/84 (75%)
 Frame = +1

Query: 7   FGDAGSTRTQLTPVTLGPEFLDASSVRKSIHSKGFFKGSSKPWSSAFDFTADPDLVLCAL 186
           +  AGS + QLTP++ G +F DA+ +R  IHSKGFF  S++ W SA D T + D+V+CAL
Sbjct: 252 YASAGSVKMQLTPLS-GIDFSDAAQIRNLIHSKGFFNASTESWLSALDCTMNQDVVICAL 310

Query: 187 GGLLGHMCRMMLGDALRNGELLSY 258
           GGL+GH+ R+ML DAL+NGE+L Y
Sbjct: 311 GGLIGHLTRLMLHDALKNGEVLPY 334


>ref|XP_003569902.1| PREDICTED: DNA mismatch repair protein Msh6-2-like [Brachypodium
           distachyon]
          Length = 1232

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 44/84 (52%), Positives = 63/84 (75%)
 Frame = +1

Query: 7   FGDAGSTRTQLTPVTLGPEFLDASSVRKSIHSKGFFKGSSKPWSSAFDFTADPDLVLCAL 186
           +  AGS + QLTP++   +F D+S +R S+HSKG+FK S+  W SA D++ + D V+CAL
Sbjct: 606 YASAGSVKMQLTPLSR-TDFSDSSQIRMSVHSKGYFKASTDSWLSALDYSMNQDAVICAL 664

Query: 187 GGLLGHMCRMMLGDALRNGELLSY 258
           GGL+GH+ R+ML DAL+NGE+L Y
Sbjct: 665 GGLIGHLTRLMLDDALKNGEVLPY 688


>ref|XP_002455059.1| hypothetical protein SORBIDRAFT_03g003700 [Sorghum bicolor]
           gi|241927034|gb|EES00179.1| hypothetical protein
           SORBIDRAFT_03g003700 [Sorghum bicolor]
          Length = 1035

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 46/84 (54%), Positives = 62/84 (73%)
 Frame = +1

Query: 7   FGDAGSTRTQLTPVTLGPEFLDASSVRKSIHSKGFFKGSSKPWSSAFDFTADPDLVLCAL 186
           +  AGS + QLTP++ G +F DAS +R  IHSKGFF  S++ W SA D   + D+V+CAL
Sbjct: 388 YASAGSVKMQLTPLS-GIDFSDASQIRMLIHSKGFFNASTESWLSALDCAVNRDVVICAL 446

Query: 187 GGLLGHMCRMMLGDALRNGELLSY 258
           GGL+GH+ R+ML DAL+NGE+L Y
Sbjct: 447 GGLIGHLTRLMLHDALKNGEVLPY 470


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