BLASTX nr result

ID: Dioscorea21_contig00038835 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00038835
         (503 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279069.2| PREDICTED: uncharacterized protein LOC100258...   162   3e-38
ref|XP_002525648.1| ubiquitin-protein ligase, putative [Ricinus ...   156   2e-36
ref|XP_002528092.1| ubiquitin-protein ligase, putative [Ricinus ...   149   2e-34
ref|XP_002264526.1| PREDICTED: uncharacterized protein LOC100247...   145   3e-33
emb|CAN70836.1| hypothetical protein VITISV_015872 [Vitis vinifera]   141   6e-32

>ref|XP_002279069.2| PREDICTED: uncharacterized protein LOC100258653 [Vitis vinifera]
           gi|297745897|emb|CBI15953.3| unnamed protein product
           [Vitis vinifera]
          Length = 485

 Score =  162 bits (410), Expect = 3e-38
 Identities = 78/160 (48%), Positives = 105/160 (65%)
 Frame = +3

Query: 9   FFVSLILILGFFSSFDLVLGPXXXXXXXXXXFLVQDVQVKAVSGPNHELMLYGFSDPPPL 188
           FF S+ LILGF+ S ++ LGP          F VQ ++V+ +  P    MLYGF +PPPL
Sbjct: 104 FFASMALILGFYGSANVQLGPHCSRLVKANSFFVQTIKVQEIDEPKPGPMLYGFYEPPPL 163

Query: 189 DINAVWSESHNSSVPPNAQKAWVYYLNQGAHINISYSITPQGLYPLILVIAQGRESLSRW 368
           D+   W E+H++SV  N  K W+++LN+G+ ++ISYS+      PL LVIAQGRESL  W
Sbjct: 164 DVENTWFETHDASVEANFHKEWIFFLNKGSKVDISYSVKAPRSSPLSLVIAQGRESLVEW 223

Query: 369 IEDPSDPNVTLFWKLIDGTGIVHQDIVEPSDHYIAVANLN 488
           IEDPS PN TL W +I G+G V Q+I + S +Y+AV NLN
Sbjct: 224 IEDPSYPNTTLSWNIIYGSGKVQQEIFKSSYYYVAVGNLN 263


>ref|XP_002525648.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223535084|gb|EEF36766.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 502

 Score =  156 bits (394), Expect = 2e-36
 Identities = 76/165 (46%), Positives = 105/165 (63%)
 Frame = +3

Query: 9   FFVSLILILGFFSSFDLVLGPXXXXXXXXXXFLVQDVQVKAVSGPNHELMLYGFSDPPPL 188
           FF S+ LILGF+ S +L LGP            VQ ++V+ V  P H  MLYGF  PPP+
Sbjct: 130 FFASMTLILGFYGSVNLELGPNCSYLIKTNPLFVQSIKVEEVDEPKHGPMLYGFHKPPPM 189

Query: 189 DINAVWSESHNSSVPPNAQKAWVYYLNQGAHINISYSITPQGLYPLILVIAQGRESLSRW 368
           D+   W+E+H + + P+ Q+ W Y+LN+G+ + I Y+I      PL LVIAQGR+SL  W
Sbjct: 190 DVETTWTETHKALILPHLQE-WAYFLNKGSKVAIFYTIKSPSSSPLSLVIAQGRDSLVEW 248

Query: 369 IEDPSDPNVTLFWKLIDGTGIVHQDIVEPSDHYIAVANLNQIKME 503
           I++PS PN TL W +I G+G + Q+I E S++YIAV NLN   +E
Sbjct: 249 IDEPSYPNSTLSWNIIFGSGKIEQEISESSNYYIAVGNLNSEDVE 293


>ref|XP_002528092.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223532481|gb|EEF34271.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 460

 Score =  149 bits (376), Expect = 2e-34
 Identities = 72/166 (43%), Positives = 108/166 (65%), Gaps = 1/166 (0%)
 Frame = +3

Query: 9   FFVSLILILGFFSSFDLVLGPXXXXXXXXXXFLVQDVQVKAVSGPNHELMLYGFSDPPPL 188
           FFVS+ LILG +    +++GP          F VQ ++V+ +   +  LMLYGF   PPL
Sbjct: 82  FFVSMTLILGVYGPVSVMIGPNTSALIRTNPFFVQSIKVQELDSNHPGLMLYGFYKTPPL 141

Query: 189 DINAVWSESHNSSVPPNAQKAWVYYLNQGAHINISYSI-TPQGLYPLILVIAQGRESLSR 365
           ++   WS+S++ +VP ++ K W+YY N+G+ INIS+S+ +P     L LVIAQG E LS+
Sbjct: 142 NVVKSWSKSYSLTVPADSHKEWIYYFNEGSQINISFSVYSPSA--SLFLVIAQGSEGLSQ 199

Query: 366 WIEDPSDPNVTLFWKLIDGTGIVHQDIVEPSDHYIAVANLNQIKME 503
           W+EDP+ PN T  W +I G+GI+ Q I + S +Y+AV NLN +++E
Sbjct: 200 WLEDPTYPNSTSSWNVIQGSGIIQQKIRKSSSYYVAVGNLNSVEVE 245


>ref|XP_002264526.1| PREDICTED: uncharacterized protein LOC100247198 [Vitis vinifera]
           gi|296083155|emb|CBI22791.3| unnamed protein product
           [Vitis vinifera]
          Length = 479

 Score =  145 bits (367), Expect = 3e-33
 Identities = 71/165 (43%), Positives = 101/165 (61%)
 Frame = +3

Query: 9   FFVSLILILGFFSSFDLVLGPXXXXXXXXXXFLVQDVQVKAVSGPNHELMLYGFSDPPPL 188
           FFVS+ LILG + S ++ LGP            VQ ++V+ +  P    MLYGF   PPL
Sbjct: 100 FFVSMTLILGVYGSVNMRLGPNCSILLHPNPLFVQYLKVEELDEPTPGPMLYGFYKVPPL 159

Query: 189 DINAVWSESHNSSVPPNAQKAWVYYLNQGAHINISYSITPQGLYPLILVIAQGRESLSRW 368
           ++   W +   +   P + + WVYYLN+G+ +NI+YS++      LILVIAQG E LS+W
Sbjct: 160 EVITTWDQKLKAYTAPYSHREWVYYLNKGSQVNITYSVSSLSSSSLILVIAQGNEGLSQW 219

Query: 369 IEDPSDPNVTLFWKLIDGTGIVHQDIVEPSDHYIAVANLNQIKME 503
           +EDP+ PN+TL W+LI G G V Q+I   S +Y+AV N N  ++E
Sbjct: 220 LEDPTYPNITLSWQLIHGNGTVQQNIYTSSSYYVAVGNTNLEEVE 264


>emb|CAN70836.1| hypothetical protein VITISV_015872 [Vitis vinifera]
          Length = 922

 Score =  141 bits (355), Expect = 6e-32
 Identities = 67/138 (48%), Positives = 89/138 (64%)
 Frame = +3

Query: 9   FFVSLILILGFFSSFDLVLGPXXXXXXXXXXFLVQDVQVKAVSGPNHELMLYGFSDPPPL 188
           FF S+ LILGF+ S ++ LGP          F VQ ++V+ +  P    MLYGF +PPPL
Sbjct: 104 FFASMALILGFYGSANVQLGPHCSRLVKANSFFVQTIKVQEIDEPKPGPMLYGFYEPPPL 163

Query: 189 DINAVWSESHNSSVPPNAQKAWVYYLNQGAHINISYSITPQGLYPLILVIAQGRESLSRW 368
           D+   W E+H++SV  N  K W+++LN+G+ ++ISYS+      PL LVIAQGRESL  W
Sbjct: 164 DVENTWFETHDASVEANFHKEWIFFLNKGSXVDISYSVKAPRSSPLSLVIAQGRESLVEW 223

Query: 369 IEDPSDPNVTLFWKLIDG 422
           IEDPS PN TL W +I G
Sbjct: 224 IEDPSYPNTTLSWNIIYG 241


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