BLASTX nr result

ID: Dioscorea21_contig00038725 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00038725
         (292 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001148056.1| ATBRCA1 [Zea mays] gi|195615546|gb|ACG29603....   113   1e-23
ref|XP_002448162.1| hypothetical protein SORBIDRAFT_06g022340 [S...   113   2e-23
tpg|DAA36947.1| TPA: ATBRCA1 [Zea mays]                               111   7e-23
emb|CAH68012.1| OSIGBa0157K09-H0214G12.23 [Oryza sativa Indica G...   109   2e-22
ref|NP_001053298.1| Os04g0512400 [Oryza sativa Japonica Group] g...   109   2e-22

>ref|NP_001148056.1| ATBRCA1 [Zea mays] gi|195615546|gb|ACG29603.1| ATBRCA1 [Zea mays]
          Length = 633

 Score =  113 bits (283), Expect = 1e-23
 Identities = 53/97 (54%), Positives = 66/97 (68%)
 Frame = -1

Query: 292 SSCGMKGAALGCYVRSCRKSFHVPCAFEISGCRRDYENFLLLCPAHASHRLPCDRSKAKK 113
           S CG+KGAALGC V+SCRKSFHVPCA+ + GC+ D ENF++LCP H+S +LPC+R K KK
Sbjct: 321 SVCGLKGAALGCLVKSCRKSFHVPCAYNVKGCKWDQENFVMLCPTHSSKKLPCERLKPKK 380

Query: 112 KTQEKHPSMESDSCKSSDNLTSLTKEGDNEFWTASTF 2
           K + + PS + D      N  S T     E WTAS F
Sbjct: 381 KAKLQQPSSDID----GPNSPSPTPMQRAELWTASPF 413


>ref|XP_002448162.1| hypothetical protein SORBIDRAFT_06g022340 [Sorghum bicolor]
           gi|241939345|gb|EES12490.1| hypothetical protein
           SORBIDRAFT_06g022340 [Sorghum bicolor]
          Length = 623

 Score =  113 bits (282), Expect = 2e-23
 Identities = 51/97 (52%), Positives = 67/97 (69%)
 Frame = -1

Query: 292 SSCGMKGAALGCYVRSCRKSFHVPCAFEISGCRRDYENFLLLCPAHASHRLPCDRSKAKK 113
           S CG+KGAALGC V+SCR SFHVPCA+ I GC+ D ENF++LC  H+S +LPC+RSK+KK
Sbjct: 321 SVCGLKGAALGCLVKSCRNSFHVPCAYNIKGCKWDQENFVMLCSTHSSKKLPCERSKSKK 380

Query: 112 KTQEKHPSMESDSCKSSDNLTSLTKEGDNEFWTASTF 2
           K + + PS ++D   S   +        +E WTAS F
Sbjct: 381 KAKLQQPSSDTDGLNSPSPMQR------DELWTASPF 411


>tpg|DAA36947.1| TPA: ATBRCA1 [Zea mays]
          Length = 631

 Score =  111 bits (277), Expect = 7e-23
 Identities = 52/97 (53%), Positives = 65/97 (67%)
 Frame = -1

Query: 292 SSCGMKGAALGCYVRSCRKSFHVPCAFEISGCRRDYENFLLLCPAHASHRLPCDRSKAKK 113
           S CG+KGAALGC V+SCRKSFHVPCA+ I GC+ D ENF++LCP H+S +LPC+R K KK
Sbjct: 321 SVCGLKGAALGCLVKSCRKSFHVPCAYNIKGCKWDQENFVMLCPTHSSKKLPCERLKPKK 380

Query: 112 KTQEKHPSMESDSCKSSDNLTSLTKEGDNEFWTASTF 2
           K + + PS + D   S   +         E WTAS F
Sbjct: 381 KAKLQQPSSDIDGPISPSPMQRA------ELWTASPF 411


>emb|CAH68012.1| OSIGBa0157K09-H0214G12.23 [Oryza sativa Indica Group]
          Length = 629

 Score =  109 bits (273), Expect = 2e-22
 Identities = 55/97 (56%), Positives = 67/97 (69%)
 Frame = -1

Query: 292 SSCGMKGAALGCYVRSCRKSFHVPCAFEISGCRRDYENFLLLCPAHASHRLPCDRSKAKK 113
           S CG+KGAALGC V+SCRKSFHVPCA  ISGCR D ENF++LCP+H+S +LPC+RSK+K 
Sbjct: 321 SVCGLKGAALGCLVKSCRKSFHVPCAHGISGCRWDDENFVMLCPSHSSKKLPCERSKSKN 380

Query: 112 KTQEKHPSMESDSCKSSDNLTSLTKEGDNEFWTASTF 2
           K   K     S S    D+L S +    +  WTAS F
Sbjct: 381 K---KTSLQRSSSDTMLDDLNSPSTIHMDGLWTASPF 414


>ref|NP_001053298.1| Os04g0512400 [Oryza sativa Japonica Group]
           gi|38345319|emb|CAE03392.2| OSJNBa0004N05.16 [Oryza
           sativa Japonica Group] gi|113564869|dbj|BAF15212.1|
           Os04g0512400 [Oryza sativa Japonica Group]
           gi|215737022|dbj|BAG95951.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218195201|gb|EEC77628.1| hypothetical protein
           OsI_16617 [Oryza sativa Indica Group]
           gi|222629197|gb|EEE61329.1| hypothetical protein
           OsJ_15441 [Oryza sativa Japonica Group]
          Length = 629

 Score =  109 bits (273), Expect = 2e-22
 Identities = 55/97 (56%), Positives = 67/97 (69%)
 Frame = -1

Query: 292 SSCGMKGAALGCYVRSCRKSFHVPCAFEISGCRRDYENFLLLCPAHASHRLPCDRSKAKK 113
           S CG+KGAALGC V+SCRKSFHVPCA  ISGCR D ENF++LCP+H+S +LPC+RSK+K 
Sbjct: 321 SVCGLKGAALGCLVKSCRKSFHVPCAHGISGCRWDDENFVMLCPSHSSKKLPCERSKSKN 380

Query: 112 KTQEKHPSMESDSCKSSDNLTSLTKEGDNEFWTASTF 2
           K   K     S S    D+L S +    +  WTAS F
Sbjct: 381 K---KTSLQRSSSDTMLDDLNSPSTIHMDGLWTASPF 414


Top