BLASTX nr result

ID: Dioscorea21_contig00038417 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00038417
         (253 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003561711.1| PREDICTED: pentatricopeptide repeat-containi...    79   3e-13
gb|EEC75067.1| hypothetical protein OsI_11193 [Oryza sativa Indi...    77   1e-12
gb|EEE58895.1| hypothetical protein OsJ_10524 [Oryza sativa Japo...    76   2e-12
gb|AFW88636.1| hypothetical protein ZEAMMB73_169634 [Zea mays]         73   2e-11
ref|XP_002468001.1| hypothetical protein SORBIDRAFT_01g037845 [S...    70   2e-10

>ref|XP_003561711.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g50990-like [Brachypodium distachyon]
          Length = 555

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 40/81 (49%), Positives = 54/81 (66%)
 Frame = +3

Query: 3   TTCLMKCLKERFFPYYCNSIIRASLEKGSPQNALQTYKALLSSAILRPDHRTLAIVLKAC 182
           T CL K     FFPY  NSI+RASLEKGSPQ +L  Y  +L+S    PD+RT  I+L+AC
Sbjct: 4   TNCLKKHPTRLFFPY-ANSILRASLEKGSPQKSLMDYGTMLNSTTFCPDYRTYGILLRAC 62

Query: 183 RISSNLHAMMECHAKIIKAGL 245
              S+++A M+ H+++ K GL
Sbjct: 63  LKYSDIYAAMQIHSRLTKVGL 83


>gb|EEC75067.1| hypothetical protein OsI_11193 [Oryza sativa Indica Group]
          Length = 619

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 37/81 (45%), Positives = 54/81 (66%)
 Frame = +3

Query: 3   TTCLMKCLKERFFPYYCNSIIRASLEKGSPQNALQTYKALLSSAILRPDHRTLAIVLKAC 182
           T CL +      FPY  N+I+RASLEKGSP+ +L  Y ++L      PD+RT  ++LKAC
Sbjct: 107 TNCLRRYPVRAIFPY-TNAILRASLEKGSPEKSLTDYNSMLRFTAFCPDYRTYVLLLKAC 165

Query: 183 RISSNLHAMMECHAKIIKAGL 245
              SN++A+ME H++++K GL
Sbjct: 166 AKCSNIYAIMEIHSQLVKLGL 186


>gb|EEE58895.1| hypothetical protein OsJ_10524 [Oryza sativa Japonica Group]
          Length = 901

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 37/81 (45%), Positives = 53/81 (65%)
 Frame = +3

Query: 3   TTCLMKCLKERFFPYYCNSIIRASLEKGSPQNALQTYKALLSSAILRPDHRTLAIVLKAC 182
           T CL +      FPY  N+I+RASLEKGSP+ +L  Y ++L      PD+RT  ++LKAC
Sbjct: 103 TNCLRRYPVRAIFPY-TNAILRASLEKGSPEKSLTDYNSMLRFTAFCPDYRTYVLLLKAC 161

Query: 183 RISSNLHAMMECHAKIIKAGL 245
              SN++A+ME H+ ++K GL
Sbjct: 162 AKCSNIYAIMEIHSHLVKLGL 182


>gb|AFW88636.1| hypothetical protein ZEAMMB73_169634 [Zea mays]
          Length = 555

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 40/78 (51%), Positives = 48/78 (61%), Gaps = 3/78 (3%)
 Frame = +3

Query: 21  CLKE---RFFPYYCNSIIRASLEKGSPQNALQTYKALLSSAILRPDHRTLAIVLKACRIS 191
           CLK+   R F  Y NSI+RASLEKGSPQ  L  Y  LL      PD+RT A +L+AC   
Sbjct: 6   CLKKHPYRIFFRYGNSILRASLEKGSPQKLLMDYSTLLHFTAFCPDYRTYAFLLRACAKC 65

Query: 192 SNLHAMMECHAKIIKAGL 245
           S+L+A ME H  + K GL
Sbjct: 66  SDLYAAMEIHCHLTKVGL 83


>ref|XP_002468001.1| hypothetical protein SORBIDRAFT_01g037845 [Sorghum bicolor]
           gi|241921855|gb|EER94999.1| hypothetical protein
           SORBIDRAFT_01g037845 [Sorghum bicolor]
          Length = 99

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 38/76 (50%), Positives = 47/76 (61%)
 Frame = +3

Query: 3   TTCLMKCLKERFFPYYCNSIIRASLEKGSPQNALQTYKALLSSAILRPDHRTLAIVLKAC 182
           T CL K    R F  Y NSI+RASLEKGSPQ +L  Y  LL      PD+RT A++L+AC
Sbjct: 20  TNCLKKH-PHRIFFRYGNSILRASLEKGSPQKSLMDYSTLLHFTAFFPDYRTYALLLRAC 78

Query: 183 RISSNLHAMMECHAKI 230
              S+L+A ME H  +
Sbjct: 79  AKCSDLYAAMEIHCHL 94


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