BLASTX nr result

ID: Dioscorea21_contig00038188 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00038188
         (443 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAR92137.1| fibrillarin 2 [Nicotiana benthamiana]                 130   9e-29
dbj|BAE91898.1| tobacco fibrillarin homolog [Nicotiana tabacum]       130   9e-29
emb|CAK32531.1| fibrillarin 2 [Nicotiana benthamiana]                 129   2e-28
ref|XP_003634097.1| PREDICTED: rRNA 2'-O-methyltransferase fibri...   127   7e-28
ref|XP_002271480.1| PREDICTED: rRNA 2'-O-methyltransferase fibri...   127   7e-28

>emb|CAR92137.1| fibrillarin 2 [Nicotiana benthamiana]
          Length = 314

 Score =  130 bits (328), Expect = 9e-29
 Identities = 63/104 (60%), Positives = 75/104 (72%)
 Frame = -1

Query: 443 VIPIIEDARHPLKYQTLVGXXXXXXXXXSQPYQVKILAQNASYFLKEDGRFMISVNANRV 264
           VIPIIEDARHP KY+ LVG         +QP Q +ILA NASYFLK  G F+IS+ AN +
Sbjct: 201 VIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCI 260

Query: 263 DPTTPPDVVFAQEIIKLYAEQFKPMDEATLEPFARDHSCIFGGY 132
           D T P + VFAQE+ KL AEQFKPM++ TLEPF RDH+C+ G Y
Sbjct: 261 DSTVPAEAVFAQEVKKLQAEQFKPMEQVTLEPFERDHACVVGAY 304


>dbj|BAE91898.1| tobacco fibrillarin homolog [Nicotiana tabacum]
          Length = 314

 Score =  130 bits (328), Expect = 9e-29
 Identities = 63/104 (60%), Positives = 75/104 (72%)
 Frame = -1

Query: 443 VIPIIEDARHPLKYQTLVGXXXXXXXXXSQPYQVKILAQNASYFLKEDGRFMISVNANRV 264
           VIPIIEDARHP KY+ LVG         +QP Q +ILA NASYFLK  G F+IS+ AN +
Sbjct: 201 VIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCI 260

Query: 263 DPTTPPDVVFAQEIIKLYAEQFKPMDEATLEPFARDHSCIFGGY 132
           D T P + VFAQE+ KL AEQFKPM++ TLEPF RDH+C+ G Y
Sbjct: 261 DSTVPAEAVFAQEVKKLQAEQFKPMEQVTLEPFERDHACVVGAY 304


>emb|CAK32531.1| fibrillarin 2 [Nicotiana benthamiana]
          Length = 314

 Score =  129 bits (325), Expect = 2e-28
 Identities = 62/104 (59%), Positives = 75/104 (72%)
 Frame = -1

Query: 443 VIPIIEDARHPLKYQTLVGXXXXXXXXXSQPYQVKILAQNASYFLKEDGRFMISVNANRV 264
           VIPIIEDARHP KY+ LVG         +QP Q +ILA NASYFLK  G F++S+ AN +
Sbjct: 201 VIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVMSIKANCI 260

Query: 263 DPTTPPDVVFAQEIIKLYAEQFKPMDEATLEPFARDHSCIFGGY 132
           D T P + VFAQE+ KL AEQFKPM++ TLEPF RDH+C+ G Y
Sbjct: 261 DSTVPAEAVFAQEVKKLQAEQFKPMEQVTLEPFERDHACVVGAY 304


>ref|XP_003634097.1| PREDICTED: rRNA 2'-O-methyltransferase fibrillarin 2-like isoform 2
           [Vitis vinifera]
          Length = 316

 Score =  127 bits (320), Expect = 7e-28
 Identities = 61/104 (58%), Positives = 74/104 (71%)
 Frame = -1

Query: 443 VIPIIEDARHPLKYQTLVGXXXXXXXXXSQPYQVKILAQNASYFLKEDGRFMISVNANRV 264
           VIPIIEDARHP KY+ LVG         +QP Q +ILA NASYFLK  G F+IS+ AN +
Sbjct: 203 VIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCI 262

Query: 263 DPTTPPDVVFAQEIIKLYAEQFKPMDEATLEPFARDHSCIFGGY 132
           D T P + VFAQE+ KL A+ FKP ++ TLEPF RDH+C+ GGY
Sbjct: 263 DSTVPAEAVFAQEVKKLQADMFKPSEQVTLEPFERDHACVVGGY 306


>ref|XP_002271480.1| PREDICTED: rRNA 2'-O-methyltransferase fibrillarin 2-like isoform 1
           [Vitis vinifera]
          Length = 311

 Score =  127 bits (320), Expect = 7e-28
 Identities = 61/104 (58%), Positives = 74/104 (71%)
 Frame = -1

Query: 443 VIPIIEDARHPLKYQTLVGXXXXXXXXXSQPYQVKILAQNASYFLKEDGRFMISVNANRV 264
           VIPIIEDARHP KY+ LVG         +QP Q +ILA NASYFLK  G F+IS+ AN +
Sbjct: 198 VIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCI 257

Query: 263 DPTTPPDVVFAQEIIKLYAEQFKPMDEATLEPFARDHSCIFGGY 132
           D T P + VFAQE+ KL A+ FKP ++ TLEPF RDH+C+ GGY
Sbjct: 258 DSTVPAEAVFAQEVKKLQADMFKPSEQVTLEPFERDHACVVGGY 301


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