BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00037199
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containi...   115   4e-24
ref|XP_002522236.1| pentatricopeptide repeat-containing protein,...   109   3e-22
gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]        108   3e-22
gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossyp...   108   3e-22
ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containi...   108   4e-22

>ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Vitis vinifera]
          Length = 824

 Score =  115 bits (288), Expect = 4e-24
 Identities = 55/87 (63%), Positives = 67/87 (77%)
 Frame = -3

Query: 274 IKCSLGKEITLCNSLLNMYCKCGMLESAERVFERMGEKSVVSWTSMISGYTRDGRFDEAI 95
           IK S GKE+TL N LL+MY K G L SA +VFE MGE+SVVSWTSMI+GY R+G  D ++
Sbjct: 278 IKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSV 337

Query: 94  ALFGKMEAEGTQPDLYAITTVLHACAC 14
            LF +ME EG  PD++ ITT+LHACAC
Sbjct: 338 RLFHEMEKEGISPDIFTITTILHACAC 364



 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 35/81 (43%), Positives = 52/81 (64%)
 Frame = -3

Query: 244 LCNSLLNMYCKCGMLESAERVFERMGEKSVVSWTSMISGYTRDGRFDEAIALFGKMEAEG 65
           + N+L++MY KCG L  A  +F+ + EK +VSWT MI+GY   G   EAIA F +M   G
Sbjct: 489 VANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSG 548

Query: 64  TQPDLYAITTVLHACACHSAI 2
            +PD  +  ++L+AC+ HS +
Sbjct: 549 IEPDEVSFISILYACS-HSGL 568



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 30/84 (35%), Positives = 53/84 (63%)
 Frame = -3

Query: 253 EITLCNSLLNMYCKCGMLESAERVFERMGEKSVVSWTSMISGYTRDGRFDEAIALFGKME 74
           ++ + N+L++MY KCG +  A  VF  M  K +VSW +MI GY+++   +EA+ LF +M+
Sbjct: 386 DLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEMQ 445

Query: 73  AEGTQPDLYAITTVLHACACHSAI 2
              ++P+   +  +L ACA  +A+
Sbjct: 446 -YNSKPNSITMACILPACASLAAL 468



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 18/98 (18%)
 Frame = -3

Query: 256 KEITLCNSLLNMYCKCG------------------MLESAERVFERMGEKSVVSWTSMIS 131
           +++ L N L+N Y K G                   +ESA ++F+ +G++ V+SW SMIS
Sbjct: 165 EKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSMIS 224

Query: 130 GYTRDGRFDEAIALFGKMEAEGTQPDLYAITTVLHACA 17
           GY  +G  ++ + LF +M   G   DL  + +V+  C+
Sbjct: 225 GYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCS 262


>ref|XP_002522236.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223538489|gb|EEF40094.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 640

 Score =  109 bits (272), Expect = 3e-22
 Identities = 50/91 (54%), Positives = 67/91 (73%)
 Frame = -3

Query: 274 IKCSLGKEITLCNSLLNMYCKCGMLESAERVFERMGEKSVVSWTSMISGYTRDGRFDEAI 95
           IK  L + +T  N+LL+MY KCG L +A RVF++MGE+SVVSWTS+I+GY R+G   E I
Sbjct: 328 IKAQLDQRMTFVNTLLDMYSKCGDLNNAIRVFQKMGERSVVSWTSLIAGYAREGLSGEGI 387

Query: 94  ALFGKMEAEGTQPDLYAITTVLHACACHSAI 2
            LF +ME EG +PD + +T VLHACAC  ++
Sbjct: 388 RLFHEMEREGVRPDNFTVTAVLHACACSGSL 418



 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 37/88 (42%), Positives = 56/88 (63%)
 Frame = -3

Query: 265 SLGKEITLCNSLLNMYCKCGMLESAERVFERMGEKSVVSWTSMISGYTRDGRFDEAIALF 86
           ++ K+  +CNSL++MY KCG +E A  VF  M  K +VSW +MI GY+++GR +E + LF
Sbjct: 432 NMQKDRIVCNSLMDMYAKCGSMEDANLVFLEMPNKDIVSWNTMIGGYSKNGRPNETLHLF 491

Query: 85  GKMEAEGTQPDLYAITTVLHACACHSAI 2
             M  E  +PD   +  +L ACA  +A+
Sbjct: 492 VAMVQE-LKPDGRTMACILPACASLAAL 518



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 31/86 (36%), Positives = 47/86 (54%)
 Frame = -3

Query: 274 IKCSLGKEITLCNSLLNMYCKCGMLESAERVFERMGEKSVVSWTSMISGYTRDGRFDEAI 95
           +K   G   T+ NSL++ Y K   +E+A  VF+ +  + +VSW SMISG   +   ++ I
Sbjct: 227 LKLGFGSYNTVVNSLISFYFKTRKIEAAYEVFDELKNRDIVSWNSMISGTVANDLPEKGI 286

Query: 94  ALFGKMEAEGTQPDLYAITTVLHACA 17
            +F +M   G   DL  +  VL ACA
Sbjct: 287 QVFKEMLYLGVSFDLVTLVNVLAACA 312


>gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
          Length = 805

 Score =  108 bits (271), Expect = 3e-22
 Identities = 53/86 (61%), Positives = 66/86 (76%)
 Frame = -3

Query: 274 IKCSLGKEITLCNSLLNMYCKCGMLESAERVFERMGEKSVVSWTSMISGYTRDGRFDEAI 95
           IK S  + I   N+LL+MY KCG L+ A RVFE+MGE++VVSWTSMI+GYTRDGR D AI
Sbjct: 278 IKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAI 337

Query: 94  ALFGKMEAEGTQPDLYAITTVLHACA 17
            L  +ME EG + D+ AIT++LHACA
Sbjct: 338 KLLQQMEKEGVKLDVVAITSILHACA 363



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 33/81 (40%), Positives = 53/81 (65%)
 Frame = -3

Query: 244 LCNSLLNMYCKCGMLESAERVFERMGEKSVVSWTSMISGYTRDGRFDEAIALFGKMEAEG 65
           + N+L+++Y KCG+L  A  +F+ +  K +VSWT MI+GY   G  +EAIA F +M   G
Sbjct: 469 VANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAG 528

Query: 64  TQPDLYAITTVLHACACHSAI 2
            +PD  +  ++L+AC+ HS +
Sbjct: 529 IEPDEVSFISILYACS-HSGL 548


>gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
          Length = 805

 Score =  108 bits (271), Expect = 3e-22
 Identities = 53/86 (61%), Positives = 66/86 (76%)
 Frame = -3

Query: 274 IKCSLGKEITLCNSLLNMYCKCGMLESAERVFERMGEKSVVSWTSMISGYTRDGRFDEAI 95
           IK S  + I   N+LL+MY KCG L+ A RVFE+MGE++VVSWTSMI+GYTRDGR D AI
Sbjct: 278 IKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAI 337

Query: 94  ALFGKMEAEGTQPDLYAITTVLHACA 17
            L  +ME EG + D+ AIT++LHACA
Sbjct: 338 KLLQQMEKEGVKLDVVAITSILHACA 363



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 33/81 (40%), Positives = 53/81 (65%)
 Frame = -3

Query: 244 LCNSLLNMYCKCGMLESAERVFERMGEKSVVSWTSMISGYTRDGRFDEAIALFGKMEAEG 65
           + N+L+++Y KCG+L  A  +F+ +  K +VSWT MI+GY   G  +EAIA F +M   G
Sbjct: 469 VANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAG 528

Query: 64  TQPDLYAITTVLHACACHSAI 2
            +PD  +  ++L+AC+ HS +
Sbjct: 529 IEPDEVSFISILYACS-HSGL 548


>ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Glycine max]
          Length = 1227

 Score =  108 bits (270), Expect = 4e-22
 Identities = 46/91 (50%), Positives = 70/91 (76%)
 Frame = -3

Query: 274 IKCSLGKEITLCNSLLNMYCKCGMLESAERVFERMGEKSVVSWTSMISGYTRDGRFDEAI 95
           +K    +E+   N+LL+MY KCG L  A + FE+MG+K+VVSWTS+I+ Y R+G +D+AI
Sbjct: 681 VKACFSREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAI 740

Query: 94  ALFGKMEAEGTQPDLYAITTVLHACACHSAI 2
            LF +ME++G  PD+Y++T+VLHACAC +++
Sbjct: 741 RLFYEMESKGVSPDVYSMTSVLHACACGNSL 771



 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 36/84 (42%), Positives = 54/84 (64%)
 Frame = -3

Query: 253  EITLCNSLLNMYCKCGMLESAERVFERMGEKSVVSWTSMISGYTRDGRFDEAIALFGKME 74
            E+ + N+L++MY KCG L  A  +F+ + EK +++WT MISG    G  +EAIA F KM 
Sbjct: 889  ELHVANALIDMYVKCGSLVHARLLFDMIPEKDLITWTVMISGCGMHGLGNEAIATFQKMR 948

Query: 73   AEGTQPDLYAITTVLHACACHSAI 2
              G +PD    T++L+AC+ HS +
Sbjct: 949  IAGIKPDEITFTSILYACS-HSGL 971



 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 31/83 (37%), Positives = 54/83 (65%)
 Frame = -3

Query: 250  ITLCNSLLNMYCKCGMLESAERVFERMGEKSVVSWTSMISGYTRDGRFDEAIALFGKMEA 71
            + + N+L++MY KCG +E A  VF ++  K +VSW +MI GY+++   +EA+ LF +M+ 
Sbjct: 790  LPVSNALMDMYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEMQK 849

Query: 70   EGTQPDLYAITTVLHACACHSAI 2
            E ++PD   +  +L AC   +A+
Sbjct: 850  E-SRPDGITMACLLPACGSLAAL 871



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 31/85 (36%), Positives = 46/85 (54%)
 Frame = -3

Query: 271 KCSLGKEITLCNSLLNMYCKCGMLESAERVFERMGEKSVVSWTSMISGYTRDGRFDEAIA 92
           K   G   T+ NSL+  Y K G ++SA ++F+ +G++ VVSW SMISG   +G    A+ 
Sbjct: 581 KLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVMNGFSHSALE 640

Query: 91  LFGKMEAEGTQPDLYAITTVLHACA 17
            F +M       DL  +   + ACA
Sbjct: 641 FFVQMLILRVGVDLATLVNSVAACA 665