BLASTX nr result

ID: Dioscorea21_contig00036942 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00036942
         (712 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27413.3| unnamed protein product [Vitis vinifera]              126   5e-27
ref|XP_002267498.2| PREDICTED: putative U-box domain-containing ...   119   6e-25
gb|ACF22715.1| beta-catenin repeat family protein [Brachypodium ...    94   4e-17
ref|XP_003563955.1| PREDICTED: putative U-box domain-containing ...    83   5e-14
dbj|BAJ89108.1| predicted protein [Hordeum vulgare subsp. vulgare]     83   5e-14

>emb|CBI27413.3| unnamed protein product [Vitis vinifera]
          Length = 949

 Score =  126 bits (316), Expect = 5e-27
 Identities = 63/143 (44%), Positives = 97/143 (67%)
 Frame = +1

Query: 229 NKSKDEKIKLTKYILSSISEIMSSVLEVNIEKENLLEFGSYLHRTTPALSELQVTENVPP 408
           N+       L + +L SISEI +SV+ +N+E+E+ +E GSYL+RT+PA+ ELQ T+N P 
Sbjct: 15  NEDTSPVSSLIQSLLVSISEITASVVCINVEQESFMELGSYLYRTSPAIIELQTTKNTPE 74

Query: 409 STTETLRSLAAKVDIAKELVEKCNSGAKSVPASELKSIIEQIEGVVNSIGQDIGTIPSNI 588
           +    L+SL+  VD+AK LV +    +  +   EL SIIEQ+EGV+  +G+++  IP + 
Sbjct: 75  NAMRILQSLSKSVDLAKNLVGQLQKDSHPISDPELGSIIEQLEGVIKLMGEELSLIPPST 134

Query: 589 FQNNKYAGTAIQSLAKEMQNAQF 657
           F N +YA  A++S++KEMQNA+F
Sbjct: 135 FGNQEYAEIAVRSVSKEMQNARF 157


>ref|XP_002267498.2| PREDICTED: putative U-box domain-containing protein 42-like [Vitis
           vinifera]
          Length = 1055

 Score =  119 bits (298), Expect = 6e-25
 Identities = 60/138 (43%), Positives = 94/138 (68%), Gaps = 3/138 (2%)
 Frame = +1

Query: 286 EIMSSVLEVNIEKENLLEFGSYLHRTTPALSELQVTENVPPSTTETLRSLAAKVDIAKEL 465
           EI +SV+ +N+E+E+ +E GSYL+RT+PA+ ELQ T+N P +    L+SL+  VD+AK L
Sbjct: 55  EITASVVCINVEQESFMELGSYLYRTSPAIIELQTTKNTPENAMRILQSLSKSVDLAKNL 114

Query: 466 VEKCNSGAKSVPASELKSIIEQIEGVVNSIGQDIGTIPSNIFQNNKYAGTAIQSLAKEMQ 645
           V +    +  +   EL SIIEQ+EGV+  +G+++  IP + F N +YA  A++S++KEMQ
Sbjct: 115 VGQLQKDSHPISDPELGSIIEQLEGVIKLMGEELSLIPPSTFGNQEYAEIAVRSVSKEMQ 174

Query: 646 NAQF---NTDVSSKNNME 690
           NA+F    T V+S   ++
Sbjct: 175 NARFGVCQTQVTSPKALQ 192


>gb|ACF22715.1| beta-catenin repeat family protein [Brachypodium distachyon]
          Length = 1088

 Score = 93.6 bits (231), Expect = 4e-17
 Identities = 47/143 (32%), Positives = 85/143 (59%)
 Frame = +1

Query: 247 KIKLTKYILSSISEIMSSVLEVNIEKENLLEFGSYLHRTTPALSELQVTENVPPSTTETL 426
           K  L + ++++ISE+MS V   ++++E  ++ GS L R  PA  ELQ  +N        +
Sbjct: 83  KALLAESVIAAISELMSMVATADVDQEKFMDVGSRLQRVPPATMELQRVQNSQTKAMHMI 142

Query: 427 RSLAAKVDIAKELVEKCNSGAKSVPASELKSIIEQIEGVVNSIGQDIGTIPSNIFQNNKY 606
             LAA VD+AK+LV +C++ A+ +  ++L+SI E ++ V+ +IG ++  IP++ F ++++
Sbjct: 143 EYLAANVDLAKDLVARCSAVAQQLMDADLQSITEDLDNVIKNIGNELSRIPTSAFGSDRF 202

Query: 607 AGTAIQSLAKEMQNAQFNTDVSS 675
           A TA+    +   N Q   D  S
Sbjct: 203 ANTAVSPHLEVTGNRQHPYDQRS 225


>ref|XP_003563955.1| PREDICTED: putative U-box domain-containing protein 42-like
           [Brachypodium distachyon]
          Length = 991

 Score = 83.2 bits (204), Expect = 5e-14
 Identities = 42/128 (32%), Positives = 74/128 (57%)
 Frame = +1

Query: 292 MSSVLEVNIEKENLLEFGSYLHRTTPALSELQVTENVPPSTTETLRSLAAKVDIAKELVE 471
           MS V   ++++E  ++ GS L R  PA  ELQ  +N        +  LAA VD+AK+LV 
Sbjct: 1   MSMVATADVDQEKFMDVGSRLQRVPPATMELQRVQNSQTKAMHMIEYLAANVDLAKDLVA 60

Query: 472 KCNSGAKSVPASELKSIIEQIEGVVNSIGQDIGTIPSNIFQNNKYAGTAIQSLAKEMQNA 651
           +C++ A+ +  ++L+SI E ++ V+ +IG ++  IP++ F ++++A TA+    +   N 
Sbjct: 61  RCSAVAQQLMDADLQSITEDLDNVIKNIGNELSRIPTSAFGSDRFANTAVSPHLEVTGNR 120

Query: 652 QFNTDVSS 675
           Q   D  S
Sbjct: 121 QHPYDQRS 128


>dbj|BAJ89108.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 991

 Score = 83.2 bits (204), Expect = 5e-14
 Identities = 42/128 (32%), Positives = 74/128 (57%)
 Frame = +1

Query: 292 MSSVLEVNIEKENLLEFGSYLHRTTPALSELQVTENVPPSTTETLRSLAAKVDIAKELVE 471
           MS++   ++ +E  ++ GS   R TPA  ELQ  +N P +       LAA VD+AK+LV 
Sbjct: 1   MSTMASADVGQEKFMDVGSRFQRVTPATMELQRVQNSPTNVMHIAEYLAANVDLAKDLVA 60

Query: 472 KCNSGAKSVPASELKSIIEQIEGVVNSIGQDIGTIPSNIFQNNKYAGTAIQSLAKEMQNA 651
           +C++ A+ +   +L+SI E ++ V+ +IG ++  IP++ F +N+ A  A  +  +   N 
Sbjct: 61  RCSAVAQQLMDEDLQSITEDLDNVIKNIGHELSRIPASAFGSNRCADAAAGTHLQVTGNG 120

Query: 652 QFNTDVSS 675
           Q ++D  S
Sbjct: 121 QHHSDQRS 128


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