BLASTX nr result

ID: Dioscorea21_contig00036927 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00036927
         (625 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAN32035.1| NADH dehydrogenase subunit B [Coelogyne cristata]      234   7e-60
sp|Q67IG8.2|NU2C_COECR RecName: Full=NAD(P)H-quinone oxidoreduct...   234   7e-60
ref|YP_054683.1| NADH dehydrogenase subunit 2 [Saccharum hybrid ...   234   7e-60
dbj|BAC84683.1| NADH dehydrogenase ND2, chloroplast [Oryza sativ...   234   7e-60
ref|NP_043076.1| NADH dehydrogenase subunit 2 [Zea mays] gi|1146...   234   7e-60

>gb|AAN32035.1| NADH dehydrogenase subunit B [Coelogyne cristata]
          Length = 492

 Score =  234 bits (598), Expect = 7e-60
 Identities = 122/165 (73%), Positives = 122/165 (73%)
 Frame = +3

Query: 3   SNDGYASMITYMLFYISMNLGTFACIVLFGLRTGTDNIRDYAGLYTKDXXXXXXXXXXXX 182
           SNDGYASMITYMLFYISMNLGTFACIV FGLRTGTDNIRDYAGLYTKD            
Sbjct: 326 SNDGYASMITYMLFYISMNLGTFACIVSFGLRTGTDNIRDYAGLYTKDPFLALSSALCLL 385

Query: 183 XXXXXXXXXXXXGKLYLFWCGWQAGLYFLVSIGSNQXXXXXXXXXXXXXXXMTGRNQEIT 362
                       GKLYLFWCGWQAGLYFLVSIG                  MTGRNQEIT
Sbjct: 386 SLGGLPPLAGFFGKLYLFWCGWQAGLYFLVSIGLLTSVVSIYYYLKIIKLLMTGRNQEIT 445

Query: 363 PHVRNYRRSPLRSNNSIELSMTVCVIASTIPGISMNPILAIAQDT 497
           PHVRNYRRSPLRSNNSIELSMTVCVIASTIPGISMNPILAIAQDT
Sbjct: 446 PHVRNYRRSPLRSNNSIELSMTVCVIASTIPGISMNPILAIAQDT 490


>sp|Q67IG8.2|NU2C_COECR RecName: Full=NAD(P)H-quinone oxidoreductase subunit 2,
           chloroplastic; AltName: Full=NAD(P)H dehydrogenase,
           subunit 2; AltName: Full=NADH-plastoquinone
           oxidoreductase subunit 2
          Length = 510

 Score =  234 bits (598), Expect = 7e-60
 Identities = 122/165 (73%), Positives = 122/165 (73%)
 Frame = +3

Query: 3   SNDGYASMITYMLFYISMNLGTFACIVLFGLRTGTDNIRDYAGLYTKDXXXXXXXXXXXX 182
           SNDGYASMITYMLFYISMNLGTFACIV FGLRTGTDNIRDYAGLYTKD            
Sbjct: 344 SNDGYASMITYMLFYISMNLGTFACIVSFGLRTGTDNIRDYAGLYTKDPFLALSSALCLL 403

Query: 183 XXXXXXXXXXXXGKLYLFWCGWQAGLYFLVSIGSNQXXXXXXXXXXXXXXXMTGRNQEIT 362
                       GKLYLFWCGWQAGLYFLVSIG                  MTGRNQEIT
Sbjct: 404 SLGGLPPLAGFFGKLYLFWCGWQAGLYFLVSIGLLTSVVSIYYYLKIIKLLMTGRNQEIT 463

Query: 363 PHVRNYRRSPLRSNNSIELSMTVCVIASTIPGISMNPILAIAQDT 497
           PHVRNYRRSPLRSNNSIELSMTVCVIASTIPGISMNPILAIAQDT
Sbjct: 464 PHVRNYRRSPLRSNNSIELSMTVCVIASTIPGISMNPILAIAQDT 508


>ref|YP_054683.1| NADH dehydrogenase subunit 2 [Saccharum hybrid cultivar NCo 310]
           gi|50812609|ref|YP_054710.1| NADH dehydrogenase subunit
           2 [Saccharum hybrid cultivar NCo 310]
           gi|118614535|ref|YP_899451.1| NADH-plastoquinone
           oxidoreductase subunit 2 [Sorghum bicolor]
           gi|118614552|ref|YP_899466.1| NADH-plastoquinone
           oxidoreductase subunit 2 [Sorghum bicolor]
           gi|260677461|ref|YP_003208263.1| NADH-plastoquinone
           oxidoreductase subunit 2 [Coix lacryma-jobi]
           gi|288558983|sp|P0CD43.1|NU2C2_SACOF RecName:
           Full=NAD(P)H-quinone oxidoreductase subunit 2 B,
           chloroplastic; AltName: Full=NAD(P)H dehydrogenase,
           subunit 2 B; AltName: Full=NADH-plastoquinone
           oxidoreductase subunit 2 B
           gi|288558987|sp|P0CD51.1|NU2C2_SORBI RecName:
           Full=NAD(P)H-quinone oxidoreductase subunit 2 B,
           chloroplastic; AltName: Full=NAD(P)H dehydrogenase,
           subunit 2 B; AltName: Full=NADH-plastoquinone
           oxidoreductase subunit 2 B
           gi|288561976|sp|P0CD42.1|NU2C1_SACOF RecName:
           Full=NAD(P)H-quinone oxidoreductase subunit 2 A,
           chloroplastic; AltName: Full=NAD(P)H dehydrogenase,
           subunit 2 A; AltName: Full=NADH-plastoquinone
           oxidoreductase subunit 2 A
           gi|288561980|sp|P0CD50.1|NU2C1_SORBI RecName:
           Full=NAD(P)H-quinone oxidoreductase subunit 2 A,
           chloroplastic; AltName: Full=NAD(P)H dehydrogenase,
           subunit 2 A; AltName: Full=NADH-plastoquinone
           oxidoreductase subunit 2 A gi|49659565|dbj|BAD27346.1|
           NADH dehydrogenase ND2 subunit [Saccharum hybrid
           cultivar NCo 310] gi|49659593|dbj|BAD27374.1| NADH
           dehydrogenase ND2 subunit [Saccharum hybrid cultivar NCo
           310] gi|118201169|gb|ABK79539.1| NADH-plastoquinone
           oxidoreductase subunit 2 [Sorghum bicolor]
           gi|118201186|gb|ABK79556.1| NADH-plastoquinone
           oxidoreductase subunit 2 [Sorghum bicolor]
           gi|209361399|gb|ACI43314.1| NADH-plastoquinone
           oxidoreductase subunit 2 [Coix lacryma-jobi]
          Length = 510

 Score =  234 bits (598), Expect = 7e-60
 Identities = 122/165 (73%), Positives = 123/165 (74%)
 Frame = +3

Query: 3   SNDGYASMITYMLFYISMNLGTFACIVLFGLRTGTDNIRDYAGLYTKDXXXXXXXXXXXX 182
           SNDGYASMITYMLFYISMNLGTFACIVLFGLRTGTDNIRDYAGLYTKD            
Sbjct: 344 SNDGYASMITYMLFYISMNLGTFACIVLFGLRTGTDNIRDYAGLYTKDPFLALSLALCLL 403

Query: 183 XXXXXXXXXXXXGKLYLFWCGWQAGLYFLVSIGSNQXXXXXXXXXXXXXXXMTGRNQEIT 362
                       GKLYLFWCGWQAGLYFLVSIG                  MTGRNQEIT
Sbjct: 404 SLGGLPPLAGFFGKLYLFWCGWQAGLYFLVSIGLLTSVLSIYYYLKIIKLLMTGRNQEIT 463

Query: 363 PHVRNYRRSPLRSNNSIELSMTVCVIASTIPGISMNPILAIAQDT 497
           P+VRNYRRSPLRSNNSIELSMTVCVIASTIPGISMNPILAIAQDT
Sbjct: 464 PYVRNYRRSPLRSNNSIELSMTVCVIASTIPGISMNPILAIAQDT 508


>dbj|BAC84683.1| NADH dehydrogenase ND2, chloroplast [Oryza sativa Japonica Group]
          Length = 512

 Score =  234 bits (598), Expect = 7e-60
 Identities = 122/165 (73%), Positives = 123/165 (74%)
 Frame = +3

Query: 3   SNDGYASMITYMLFYISMNLGTFACIVLFGLRTGTDNIRDYAGLYTKDXXXXXXXXXXXX 182
           SNDGYASMITYMLFYISMNLGTFACIVLFGLRTGTDNIRDYAGLYTKD            
Sbjct: 346 SNDGYASMITYMLFYISMNLGTFACIVLFGLRTGTDNIRDYAGLYTKDPFLALSLALCLL 405

Query: 183 XXXXXXXXXXXXGKLYLFWCGWQAGLYFLVSIGSNQXXXXXXXXXXXXXXXMTGRNQEIT 362
                       GKLYLFWCGWQAGLYFLVSIG                  MTGRNQEIT
Sbjct: 406 SLGGLPPLAGFFGKLYLFWCGWQAGLYFLVSIGLLTSVLSIYYYLKIVKLLMTGRNQEIT 465

Query: 363 PHVRNYRRSPLRSNNSIELSMTVCVIASTIPGISMNPILAIAQDT 497
           P+VRNYRRSPLRSNNSIELSMTVCVIASTIPGISMNPILAIAQDT
Sbjct: 466 PYVRNYRRSPLRSNNSIELSMTVCVIASTIPGISMNPILAIAQDT 510


>ref|NP_043076.1| NADH dehydrogenase subunit 2 [Zea mays]
           gi|11467270|ref|NP_043102.1| NADH dehydrogenase subunit
           2 [Zea mays] gi|345895261|ref|YP_004841992.1|
           NADH-plastoquinone oxidoreductase subunit 2 [Panicum
           virgatum] gi|345895278|ref|YP_004842009.1|
           NADH-plastoquinone oxidoreductase subunit 2 [Panicum
           virgatum] gi|902273|emb|CAA60338.1| NADH dehydrogenase
           ND2 [Zea mays] gi|902299|emb|CAA60363.1| NADH
           dehydrogenase ND2 [Zea mays] gi|319412363|gb|ADV41899.1|
           NADH-plastoquinone oxidoreductase subunit 2
           (chloroplast) [Panicum virgatum]
           gi|319412380|gb|ADV41916.1| NADH-plastoquinone
           oxidoreductase subunit 2 (chloroplast) [Panicum
           virgatum] gi|319412449|gb|ADV41984.1| NADH-plastoquinone
           oxidoreductase subunit 2 (chloroplast) [Panicum
           virgatum] gi|319412466|gb|ADV42001.1| NADH-plastoquinone
           oxidoreductase subunit 2 (chloroplast) [Panicum
           virgatum] gi|414871190|tpg|DAA49747.1| TPA:
           NAD(P)H-quinone oxidoreductase subunit 2 A, (NAD(P)H
           dehydrogenase, subunit 2 A) [Zea mays]
           gi|414885047|tpg|DAA61061.1| TPA: NAD(P)H-quinone
           oxidoreductase subunit 2 A, (NAD(P)H dehydrogenase,
           subunit 2 A) [Zea mays]
          Length = 510

 Score =  234 bits (598), Expect = 7e-60
 Identities = 122/165 (73%), Positives = 123/165 (74%)
 Frame = +3

Query: 3   SNDGYASMITYMLFYISMNLGTFACIVLFGLRTGTDNIRDYAGLYTKDXXXXXXXXXXXX 182
           SNDGYASMITYMLFYISMNLGTFACIVLFGLRTGTDNIRDYAGLYTKD            
Sbjct: 344 SNDGYASMITYMLFYISMNLGTFACIVLFGLRTGTDNIRDYAGLYTKDPFLALSLALCLL 403

Query: 183 XXXXXXXXXXXXGKLYLFWCGWQAGLYFLVSIGSNQXXXXXXXXXXXXXXXMTGRNQEIT 362
                       GKLYLFWCGWQAGLYFLVSIG                  MTGRNQEIT
Sbjct: 404 SLGGLPPLAGFFGKLYLFWCGWQAGLYFLVSIGLLTSVLSIYYYLKIIKLLMTGRNQEIT 463

Query: 363 PHVRNYRRSPLRSNNSIELSMTVCVIASTIPGISMNPILAIAQDT 497
           P+VRNYRRSPLRSNNSIELSMTVCVIASTIPGISMNPILAIAQDT
Sbjct: 464 PYVRNYRRSPLRSNNSIELSMTVCVIASTIPGISMNPILAIAQDT 508


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