BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00036912
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_006503731.1| ribosomal protein L2 (chloroplast) [Erycina ...    77   5e-17
ref|YP_001294394.1| ribosomal protein L2 [Dioscorea elephantipes...    76   1e-16
gb|ADD30240.1| ribosomal protein L2 [Oxalis latifolia] gi|340807...    75   2e-16
ref|YP_740266.1| ribosomal protein L2 [Liriodendron tulipifera] ...    74   3e-16
ref|YP_740243.1| ribosomal protein L2 [Liriodendron tulipifera] ...    74   3e-16

>ref|YP_006503731.1| ribosomal protein L2 (chloroplast) [Erycina pusilla]
           gi|395001726|ref|YP_006503742.1| ribosomal protein L2
           (chloroplast) [Erycina pusilla]
           gi|339431343|gb|AEJ72537.1| ribosomal protein L2
           (chloroplast) [Erycina pusilla]
           gi|339431355|gb|AEJ72549.1| ribosomal protein L2
           (chloroplast) [Erycina pusilla]
          Length = 272

 Score = 77.0 bits (188), Expect(2) = 5e-17
 Identities = 38/46 (82%), Positives = 40/46 (86%), Gaps = 1/46 (2%)
 Frame = +1

Query: 169 SKTRSTHNGAVDSQVKSSLR-NLISGQHHCGKGHNARGIITAGHRG 303
           + T STHNGAVDSQVKS+ R NLI GQHHCGKG NARGIITAGHRG
Sbjct: 6   TSTPSTHNGAVDSQVKSNPRKNLIYGQHHCGKGRNARGIITAGHRG 51



 Score = 35.4 bits (80), Expect(2) = 5e-17
 Identities = 15/17 (88%), Positives = 15/17 (88%)
 Frame = +3

Query: 303 GGHKHLYRKIDFRRMEK 353
           GGHK LYRKIDFRR EK
Sbjct: 52  GGHKRLYRKIDFRRNEK 68


>ref|YP_001294394.1| ribosomal protein L2 [Dioscorea elephantipes]
           gi|149390418|ref|YP_001294417.1| ribosomal protein L2
           [Dioscorea elephantipes]
           gi|160419181|sp|A6MMP9.1|RK2_DIOEL RecName: Full=50S
           ribosomal protein L2, chloroplastic
           gi|148668087|gb|ABR01471.1| ribosomal protein L2
           [Dioscorea elephantipes] gi|148668110|gb|ABR01494.1|
           ribosomal protein L2 [Dioscorea elephantipes]
          Length = 274

 Score = 75.9 bits (185), Expect(2) = 1e-16
 Identities = 38/46 (82%), Positives = 40/46 (86%), Gaps = 1/46 (2%)
 Frame = +1

Query: 169 SKTRSTHNGAVDSQVKSSLRN-LISGQHHCGKGHNARGIITAGHRG 303
           + T ST NGAVDSQVKS+LRN LISGQH CGKG NARGIITAGHRG
Sbjct: 8   TSTPSTRNGAVDSQVKSNLRNNLISGQHRCGKGRNARGIITAGHRG 53



 Score = 35.4 bits (80), Expect(2) = 1e-16
 Identities = 15/17 (88%), Positives = 15/17 (88%)
 Frame = +3

Query: 303 GGHKHLYRKIDFRRMEK 353
           GGHK LYRKIDFRR EK
Sbjct: 54  GGHKRLYRKIDFRRNEK 70


>gb|ADD30240.1| ribosomal protein L2 [Oxalis latifolia] gi|340807130|gb|AEK71728.1|
           ribosomal protein L2 [Oxalis latifolia]
          Length = 274

 Score = 74.7 bits (182), Expect(2) = 2e-16
 Identities = 37/46 (80%), Positives = 39/46 (84%), Gaps = 1/46 (2%)
 Frame = +1

Query: 169 SKTRSTHNGAVDSQVKSSLRN-LISGQHHCGKGHNARGIITAGHRG 303
           + T ST NGAVDSQVKS+ RN LI GQHHCGKG NARGIITAGHRG
Sbjct: 8   TSTPSTRNGAVDSQVKSNTRNNLIYGQHHCGKGRNARGIITAGHRG 53



 Score = 35.4 bits (80), Expect(2) = 2e-16
 Identities = 15/17 (88%), Positives = 15/17 (88%)
 Frame = +3

Query: 303 GGHKHLYRKIDFRRMEK 353
           GGHK LYRKIDFRR EK
Sbjct: 54  GGHKRLYRKIDFRRNEK 70


>ref|YP_740266.1| ribosomal protein L2 [Liriodendron tulipifera]
           gi|122239935|sp|Q0G9F5.1|RK2A_LIRTU RecName: Full=50S
           ribosomal protein L2-A, chloroplastic
           gi|113201059|gb|ABI32574.1| ribosomal protein L2
           [Liriodendron tulipifera]
          Length = 273

 Score = 74.3 bits (181), Expect(2) = 3e-16
 Identities = 37/46 (80%), Positives = 39/46 (84%), Gaps = 1/46 (2%)
 Frame = +1

Query: 169 SKTRSTHNGAVDSQVKSSLRN-LISGQHHCGKGHNARGIITAGHRG 303
           + T ST NGAVDSQVKS+ RN LI GQHHCGKG NARGIITAGHRG
Sbjct: 7   TSTPSTRNGAVDSQVKSNPRNNLIHGQHHCGKGRNARGIITAGHRG 52



 Score = 35.4 bits (80), Expect(2) = 3e-16
 Identities = 15/17 (88%), Positives = 15/17 (88%)
 Frame = +3

Query: 303 GGHKHLYRKIDFRRMEK 353
           GGHK LYRKIDFRR EK
Sbjct: 53  GGHKRLYRKIDFRRNEK 69


>ref|YP_740243.1| ribosomal protein L2 [Liriodendron tulipifera]
           gi|122239937|sp|Q0G9H8.1|RK2B_LIRTU RecName: Full=50S
           ribosomal protein L2-B, chloroplastic
           gi|113201035|gb|ABI32550.1| ribosomal protein L2
           [Liriodendron tulipifera]
          Length = 273

 Score = 74.3 bits (181), Expect(2) = 3e-16
 Identities = 37/46 (80%), Positives = 39/46 (84%), Gaps = 1/46 (2%)
 Frame = +1

Query: 169 SKTRSTHNGAVDSQVKSSLRN-LISGQHHCGKGHNARGIITAGHRG 303
           + T ST NGAVDSQVKS+ RN LI GQHHCGKG NARGIITAGHRG
Sbjct: 8   TSTPSTRNGAVDSQVKSNPRNNLIHGQHHCGKGRNARGIITAGHRG 53



 Score = 35.4 bits (80), Expect(2) = 3e-16
 Identities = 15/17 (88%), Positives = 15/17 (88%)
 Frame = +3

Query: 303 GGHKHLYRKIDFRRMEK 353
           GGHK LYRKIDFRR EK
Sbjct: 54  GGHKRLYRKIDFRRNEK 70