BLASTX nr result

ID: Dioscorea21_contig00036906 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00036906
         (243 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28135.3| unnamed protein product [Vitis vinifera]              107   8e-22
ref|XP_002281645.1| PREDICTED: pentatricopeptide repeat-containi...   107   8e-22
gb|AEP33733.1| chlororespiratory reduction 21, partial [Lepidium...   102   2e-20
gb|AEP33734.1| chlororespiratory reduction 21, partial [Lepidium...   102   3e-20
gb|AEP33732.1| chlororespiratory reduction 21, partial [Draba ne...    99   3e-19

>emb|CBI28135.3| unnamed protein product [Vitis vinifera]
          Length = 1974

 Score =  107 bits (268), Expect = 8e-22
 Identities = 48/65 (73%), Positives = 58/65 (89%)
 Frame = +2

Query: 41   ILNQMEADEIPVGPEIYGELLQGCVYERALREGQQIHARILKNGSFFSENEYLVTKLLVF 220
            +L++ME ++  +GPEIYGELLQGCVYERAL  GQQIHARILKNG FF++NEY+ TKL+VF
Sbjct: 1161 LLSEMEFEDFQIGPEIYGELLQGCVYERALHTGQQIHARILKNGDFFAKNEYVETKLVVF 1220

Query: 221  YAKCD 235
            YAKCD
Sbjct: 1221 YAKCD 1225


>ref|XP_002281645.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
           chloroplastic-like [Vitis vinifera]
          Length = 858

 Score =  107 bits (268), Expect = 8e-22
 Identities = 48/65 (73%), Positives = 58/65 (89%)
 Frame = +2

Query: 41  ILNQMEADEIPVGPEIYGELLQGCVYERALREGQQIHARILKNGSFFSENEYLVTKLLVF 220
           +L++ME ++  +GPEIYGELLQGCVYERAL  GQQIHARILKNG FF++NEY+ TKL+VF
Sbjct: 66  LLSEMEFEDFQIGPEIYGELLQGCVYERALHTGQQIHARILKNGDFFAKNEYVETKLVVF 125

Query: 221 YAKCD 235
           YAKCD
Sbjct: 126 YAKCD 130


>gb|AEP33733.1| chlororespiratory reduction 21, partial [Lepidium sativum]
          Length = 805

 Score =  102 bits (255), Expect = 2e-20
 Identities = 45/68 (66%), Positives = 57/68 (83%)
 Frame = +2

Query: 32  AFRILNQMEADEIPVGPEIYGELLQGCVYERALREGQQIHARILKNGSFFSENEYLVTKL 211
           A R++ +M+   + +GPEIYGE+LQGCVYER L  GQQIHARILKNG+F++ NEY+ TKL
Sbjct: 32  ALRLVKEMDFRNVRIGPEIYGEILQGCVYERDLCTGQQIHARILKNGAFYARNEYIETKL 91

Query: 212 LVFYAKCD 235
           L+FYAKCD
Sbjct: 92  LIFYAKCD 99


>gb|AEP33734.1| chlororespiratory reduction 21, partial [Lepidium virginicum]
          Length = 788

 Score =  102 bits (254), Expect = 3e-20
 Identities = 45/68 (66%), Positives = 56/68 (82%)
 Frame = +2

Query: 32  AFRILNQMEADEIPVGPEIYGELLQGCVYERALREGQQIHARILKNGSFFSENEYLVTKL 211
           A R++ +ME   + +GPEIYGE+LQGCVYER L  GQQIHARILKNG F++ N+Y+ TKL
Sbjct: 14  ALRLVKEMEFRNVRIGPEIYGEILQGCVYERDLCTGQQIHARILKNGDFYARNQYIETKL 73

Query: 212 LVFYAKCD 235
           L+FYAKCD
Sbjct: 74  LIFYAKCD 81


>gb|AEP33732.1| chlororespiratory reduction 21, partial [Draba nemorosa]
          Length = 829

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 43/68 (63%), Positives = 56/68 (82%)
 Frame = +2

Query: 32  AFRILNQMEADEIPVGPEIYGELLQGCVYERALREGQQIHARILKNGSFFSENEYLVTKL 211
           A  ++ +M +  + +GPEIYGE+LQGCVYER L  GQQIHARILKNG F+++NEY+ TKL
Sbjct: 49  ALGLVTEMGSRNVRIGPEIYGEILQGCVYERDLSTGQQIHARILKNGDFYAKNEYIETKL 108

Query: 212 LVFYAKCD 235
           ++FYAKCD
Sbjct: 109 VIFYAKCD 116


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