BLASTX nr result

ID: Dioscorea21_contig00036902 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00036902
         (331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15033.3| unnamed protein product [Vitis vinifera]              105   5e-21
ref|XP_002279402.2| PREDICTED: serine/threonine-protein kinase A...    91   7e-17
ref|XP_003601261.1| Serine/threonine protein kinase ATM [Medicag...    80   2e-13
ref|XP_003569503.1| PREDICTED: LOW QUALITY PROTEIN: serine/threo...    80   2e-13
ref|XP_004138280.1| PREDICTED: LOW QUALITY PROTEIN: serine/threo...    76   3e-12

>emb|CBI15033.3| unnamed protein product [Vitis vinifera]
          Length = 3085

 Score =  105 bits (261), Expect = 5e-21
 Identities = 50/108 (46%), Positives = 69/108 (63%), Gaps = 1/108 (0%)
 Frame = +3

Query: 9   YSHDNILWLLWTFQELLF-VLCPSSDERLPQHPCFTSGETVKIRNAWHAIWSCLMHGLPM 185
           +++D +LW L + QE    +L P     +   P FTS E     N WH IWSCLMHGLP+
Sbjct: 434 HAYDGLLWTLRSLQEFSSELLLPVLGAEMLMRPSFTSNE---FDNGWHTIWSCLMHGLPI 490

Query: 186 FSKVASVADAALTLLGNMTLTEQIGAAVVPQDVWNLRIFNNVPSLSAL 329
           FS + SV DAAL LLGN+   + I   +VPQ++W+LR+F ++PS+S L
Sbjct: 491 FSNITSVVDAALVLLGNIVSNDLISTPIVPQEIWDLRLFKHMPSVSVL 538


>ref|XP_002279402.2| PREDICTED: serine/threonine-protein kinase ATM [Vitis vinifera]
          Length = 2956

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 45/100 (45%), Positives = 63/100 (63%), Gaps = 1/100 (1%)
 Frame = +3

Query: 33  LLWTFQEL-LFVLCPSSDERLPQHPCFTSGETVKIRNAWHAIWSCLMHGLPMFSKVASVA 209
           LLWT + L ++ L  +SD    +          +  N WH IWSCLMHGLP+FS + SV 
Sbjct: 379 LLWTLRMLGVYYLWFASDMETSRG---------QFDNGWHTIWSCLMHGLPIFSNITSVV 429

Query: 210 DAALTLLGNMTLTEQIGAAVVPQDVWNLRIFNNVPSLSAL 329
           DAAL LLGN+   + I   +VPQ++W+LR+F ++PS+S L
Sbjct: 430 DAALVLLGNIVSNDLISTPIVPQEIWDLRLFKHMPSVSVL 469


>ref|XP_003601261.1| Serine/threonine protein kinase ATM [Medicago truncatula]
           gi|355490309|gb|AES71512.1| Serine/threonine protein
           kinase ATM [Medicago truncatula]
          Length = 641

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 40/104 (38%), Positives = 62/104 (59%), Gaps = 1/104 (0%)
 Frame = +3

Query: 12  SHDNILWLLWTFQELLF-VLCPSSDERLPQHPCFTSGETVKIRNAWHAIWSCLMHGLPMF 188
           ++D +LW L    EL   +L P+S  ++   P  T  E +   N W  +WS ++HGLP+F
Sbjct: 481 AYDGLLWTLRYATELSSALLLPNSMIKISSMPPSTLNEVI---NGWKVLWSTIVHGLPIF 537

Query: 189 SKVASVADAALTLLGNMTLTEQIGAAVVPQDVWNLRIFNNVPSL 320
           S +A + DAALTLL N+T  + +   ++PQDVW+L+ F    S+
Sbjct: 538 SNIAILVDAALTLLSNITSNDLVDTCLIPQDVWDLQFFKRPTSM 581


>ref|XP_003569503.1| PREDICTED: LOW QUALITY PROTEIN: serine/threonine-protein kinase
           ATM-like [Brachypodium distachyon]
          Length = 2841

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 40/104 (38%), Positives = 62/104 (59%)
 Frame = +3

Query: 18  DNILWLLWTFQELLFVLCPSSDERLPQHPCFTSGETVKIRNAWHAIWSCLMHGLPMFSKV 197
           D++LWL+ + +E    L  ++ +    H   T GE   +   W  IW+ L+H LP+FS  
Sbjct: 367 DSLLWLIRSLKEFSATLIVNTRDE--SHFLPTKGEMSIVEGYWQDIWNSLIHALPLFSST 424

Query: 198 ASVADAALTLLGNMTLTEQIGAAVVPQDVWNLRIFNNVPSLSAL 329
           A VAD+AL+LLG M + +Q+  + V +D W+L+ F + PS SAL
Sbjct: 425 ALVADSALSLLGGMIMRDQVHTSFVSEDTWDLQTFKHRPSSSAL 468


>ref|XP_004138280.1| PREDICTED: LOW QUALITY PROTEIN: serine/threonine-protein kinase
           ATM-like [Cucumis sativus]
          Length = 2985

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 34/68 (50%), Positives = 46/68 (67%)
 Frame = +3

Query: 126 VKIRNAWHAIWSCLMHGLPMFSKVASVADAALTLLGNMTLTEQIGAAVVPQDVWNLRIFN 305
           +++   W +IWSCLMHGLPMF+ V  VA+AAL LLG +   + +   V+PQDVW    F 
Sbjct: 414 LQLYQGWQSIWSCLMHGLPMFTHVFVVAEAALLLLGKIIERDSMKMCVIPQDVWEHLFFK 473

Query: 306 NVPSLSAL 329
            +PS+SAL
Sbjct: 474 RMPSISAL 481