BLASTX nr result

ID: Dioscorea21_contig00036896 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00036896
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_588382.1| hypothetical protein ZeamMp129 [Zea mays subsp....   141   1e-40
tpg|DAA38079.1| TPA: hypothetical protein ZEAMMB73_787989 [Zea m...   141   1e-40
gb|AGE93411.1| ribosomal protein L2 [Alpinia zerumbet] gi|449326...   144   7e-33
ref|YP_007476089.1| ribosomal protein L2 [Dasypogon bromeliifoli...   144   7e-33
ref|YP_007475917.1| ribosomal protein L2 [Calamus caryotoides] g...   144   7e-33

>ref|YP_588382.1| hypothetical protein ZeamMp129 [Zea mays subsp. mays]
           gi|40795019|gb|AAR91063.1| hypothetical protein
           (mitochondrion) [Zea mays] gi|414587509|tpg|DAA38080.1|
           TPA: putative uncharacterized protein orf247-ct [Zea
           mays] gi|414871184|tpg|DAA49741.1| TPA: putative
           uncharacterized protein orf247-ct [Zea mays]
          Length = 247

 Score =  141 bits (355), Expect(2) = 1e-40
 Identities = 67/93 (72%), Positives = 70/93 (75%)
 Frame = +1

Query: 1   LISKNCLATXXXXXXXXXXXKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIG 180
           L+S+NCLAT           KSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEG+APIG
Sbjct: 73  LVSQNCLATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGKAPIG 132

Query: 181 RKKPTTPWGYPALGXXXXXXXXXXXXFILRRRK 279
           RKKPTTPWGYPALG            FILRRRK
Sbjct: 133 RKKPTTPWGYPALGRRTRKRKKYSDSFILRRRK 165



 Score = 50.4 bits (119), Expect(2) = 1e-40
 Identities = 24/24 (100%), Positives = 24/24 (100%)
 Frame = +3

Query: 291 MGERRELNPRMVDSQSTALIHLAT 362
           MGERRELNPRMVDSQSTALIHLAT
Sbjct: 186 MGERRELNPRMVDSQSTALIHLAT 209


>tpg|DAA38079.1| TPA: hypothetical protein ZEAMMB73_787989 [Zea mays]
          Length = 232

 Score =  141 bits (355), Expect(2) = 1e-40
 Identities = 67/93 (72%), Positives = 70/93 (75%)
 Frame = +1

Query: 1   LISKNCLATXXXXXXXXXXXKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIG 180
           L+S+NCLAT           KSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEG+APIG
Sbjct: 58  LVSQNCLATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGKAPIG 117

Query: 181 RKKPTTPWGYPALGXXXXXXXXXXXXFILRRRK 279
           RKKPTTPWGYPALG            FILRRRK
Sbjct: 118 RKKPTTPWGYPALGRRTRKRKKYSDSFILRRRK 150



 Score = 50.4 bits (119), Expect(2) = 1e-40
 Identities = 24/24 (100%), Positives = 24/24 (100%)
 Frame = +3

Query: 291 MGERRELNPRMVDSQSTALIHLAT 362
           MGERRELNPRMVDSQSTALIHLAT
Sbjct: 171 MGERRELNPRMVDSQSTALIHLAT 194


>gb|AGE93411.1| ribosomal protein L2 [Alpinia zerumbet] gi|449326856|gb|AGE93434.1|
           ribosomal protein L2 [Alpinia zerumbet]
          Length = 273

 Score =  144 bits (363), Expect = 7e-33
 Identities = 70/93 (75%), Positives = 70/93 (75%)
 Frame = +1

Query: 1   LISKNCLATXXXXXXXXXXXKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIG 180
           LISKNCLAT           KSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIG
Sbjct: 181 LISKNCLATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIG 240

Query: 181 RKKPTTPWGYPALGXXXXXXXXXXXXFILRRRK 279
           RKKPTTPWGYPALG            FILRRRK
Sbjct: 241 RKKPTTPWGYPALGRRSRKRKKYSDSFILRRRK 273


>ref|YP_007476089.1| ribosomal protein L2 [Dasypogon bromeliifolius]
           gi|456061951|ref|YP_007476111.1| ribosomal protein L2
           [Dasypogon bromeliifolius] gi|449326572|gb|AGE93153.1|
           ribosomal protein L2 [Dasypogon bromeliifolius]
           gi|449326596|gb|AGE93177.1| ribosomal protein L2
           [Dasypogon bromeliifolius]
          Length = 273

 Score =  144 bits (363), Expect = 7e-33
 Identities = 70/93 (75%), Positives = 70/93 (75%)
 Frame = +1

Query: 1   LISKNCLATXXXXXXXXXXXKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIG 180
           LISKNCLAT           KSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIG
Sbjct: 181 LISKNCLATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIG 240

Query: 181 RKKPTTPWGYPALGXXXXXXXXXXXXFILRRRK 279
           RKKPTTPWGYPALG            FILRRRK
Sbjct: 241 RKKPTTPWGYPALGRRSRKRKKYSDSFILRRRK 273


>ref|YP_007475917.1| ribosomal protein L2 [Calamus caryotoides]
           gi|456330956|ref|YP_007475938.1| ribosomal protein L2
           [Calamus caryotoides] gi|449326398|gb|AGE92981.1|
           ribosomal protein L2 [Calamus caryotoides]
           gi|449326421|gb|AGE93004.1| ribosomal protein L2
           [Calamus caryotoides]
          Length = 273

 Score =  144 bits (363), Expect = 7e-33
 Identities = 70/93 (75%), Positives = 70/93 (75%)
 Frame = +1

Query: 1   LISKNCLATXXXXXXXXXXXKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIG 180
           LISKNCLAT           KSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIG
Sbjct: 181 LISKNCLATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIG 240

Query: 181 RKKPTTPWGYPALGXXXXXXXXXXXXFILRRRK 279
           RKKPTTPWGYPALG            FILRRRK
Sbjct: 241 RKKPTTPWGYPALGRRSRKRKKYSDSFILRRRK 273


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