BLASTX nr result

ID: Dioscorea21_contig00036862 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00036862
         (529 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAG96261.1| unnamed protein product [Oryza sativa Japonica G...    97   2e-18
dbj|BAD61105.1| unknown protein [Oryza sativa Japonica Group] gi...    84   2e-14
gb|EEC69957.1| hypothetical protein OsI_00415 [Oryza sativa Indi...    82   5e-14
gb|EAZ01457.1| hypothetical protein OsI_23494 [Oryza sativa Indi...    81   1e-13
emb|CAC95126.1| gag-pol polyprotein [Populus deltoides]                73   3e-11

>dbj|BAG96261.1| unnamed protein product [Oryza sativa Japonica Group]
           gi|222635800|gb|EEE65932.1| hypothetical protein
           OsJ_21799 [Oryza sativa Japonica Group]
          Length = 339

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 52/172 (30%), Positives = 86/172 (50%), Gaps = 3/172 (1%)
 Frame = -3

Query: 509 MTSSTSAPHFLAPVDIKLNGSNYREWFTTVRIVLLGMDLLGHADGTSSQPSTPD---ASW 339
           M S       L P+DIKLNG NYREW ++ R+ L    +  H +         +   A+W
Sbjct: 1   MASDPLGNVILLPLDIKLNGQNYREWASSARMQLRSYGVASHLNDDPPHEKEDEKKIAAW 60

Query: 338 TLADRRTMTIICQSCEIDVRMEIGHLSTAHAMWEHLGHMFEHSSSARQYAILQDLTHIQQ 159
              D R M  +C S E+ +RM    LS+A  MWE+L   ++ SS+A ++++ + L  ++Q
Sbjct: 61  RRNDERVMAFLCMSAEVPIRMNFIDLSSAKKMWEYLQQRYQQSSAALRFSLRKSLQSLEQ 120

Query: 158 RERSVREYVSDLRSLWRQIDSLEESXXXXXXXXXXXTQSRQIQRTFEFLMRL 3
            + ++ E+ +   SL RQ+DS+               +  +    F+F+MRL
Sbjct: 121 GDMTIEEFHNAFTSLSRQLDSMVPKAGGGCRQCICKEKYEEQSLMFDFVMRL 172


>dbj|BAD61105.1| unknown protein [Oryza sativa Japonica Group]
           gi|125569041|gb|EAZ10556.1| hypothetical protein
           OsJ_00390 [Oryza sativa Japonica Group]
          Length = 337

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 49/164 (29%), Positives = 81/164 (49%), Gaps = 5/164 (3%)
 Frame = -3

Query: 479 LAPVDIKLNGSNYREWFTTVRIVLLGMDLLGHADGTSSQP-----STPDASWTLADRRTM 315
           L   DIKLNG NY+EW  + R++L  +    H   T   P     +T   +W  AD R M
Sbjct: 13  LLSTDIKLNGQNYQEWELSARMLLRSIGQASHL--TDDPPDEKTDATKIKAWKTADDRVM 70

Query: 314 TIICQSCEIDVRMEIGHLSTAHAMWEHLGHMFEHSSSARQYAILQDLTHIQQRERSVREY 135
             I  S E+ +RM     STA  MW++L   +   S A ++++LQ+L ++QQ+++S+ E+
Sbjct: 71  GFIFMSVEVPIRMSFRDHSTAKEMWDYLKQRYTQESGALRFSLLQNLHNLQQQDQSIEEF 130

Query: 134 VSDLRSLWRQIDSLEESXXXXXXXXXXXTQSRQIQRTFEFLMRL 3
            +    L  Q+++                +  Q    ++F+MRL
Sbjct: 131 YNAFTRLSGQLEAQTPKGASGCAQCKAREKHDQENLVYQFVMRL 174


>gb|EEC69957.1| hypothetical protein OsI_00415 [Oryza sativa Indica Group]
          Length = 463

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 48/164 (29%), Positives = 81/164 (49%), Gaps = 5/164 (3%)
 Frame = -3

Query: 479 LAPVDIKLNGSNYREWFTTVRIVLLGMDLLGHADGTSSQP-----STPDASWTLADRRTM 315
           L   DIKLNG NY+EW  + R++L  +    H   T   P     +T   +W  AD R M
Sbjct: 139 LLSTDIKLNGQNYQEWELSARMLLRSIGQASHL--TDDPPDEKTDATKIKAWKTADDRVM 196

Query: 314 TIICQSCEIDVRMEIGHLSTAHAMWEHLGHMFEHSSSARQYAILQDLTHIQQRERSVREY 135
             I  S E+ +RM     STA  MW++L   +   S A ++++L++L ++QQ+++S+ E+
Sbjct: 197 GFIFMSVEVPIRMSFRDHSTAKEMWDYLKQRYTQESGALRFSLLKNLHNLQQQDQSIEEF 256

Query: 134 VSDLRSLWRQIDSLEESXXXXXXXXXXXTQSRQIQRTFEFLMRL 3
            +    L  Q+++                +  Q    ++F+MRL
Sbjct: 257 YNAFTRLSGQLEAQTPKGASGCAQCKAREKHDQENLVYQFVMRL 300


>gb|EAZ01457.1| hypothetical protein OsI_23494 [Oryza sativa Indica Group]
          Length = 125

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 40/125 (32%), Positives = 66/125 (52%), Gaps = 3/125 (2%)
 Frame = -3

Query: 509 MTSSTSAPHFLAPVDIKLNGSNYREWFTTVRIVLLGMDLLGHADGTSSQPSTPD---ASW 339
           M S       L P+DIKLNG NYREW ++ R+ L    +  H +         +   A+W
Sbjct: 1   MASDPLGNVILLPLDIKLNGQNYREWASSARMQLRSYGVASHLNDDPPHEKEDEKKIAAW 60

Query: 338 TLADRRTMTIICQSCEIDVRMEIGHLSTAHAMWEHLGHMFEHSSSARQYAILQDLTHIQQ 159
              D R M  +C S E+ +RM    LS+A  MWE+L   ++ SS+A ++++ + L  ++Q
Sbjct: 61  RRNDERVMAFLCMSAEVPIRMNFIDLSSAKKMWEYLQQRYQQSSAALRFSLRKSLQSLEQ 120

Query: 158 RERSV 144
            + ++
Sbjct: 121 GDMTI 125


>emb|CAC95126.1| gag-pol polyprotein [Populus deltoides]
          Length = 1382

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 46/173 (26%), Positives = 79/173 (45%), Gaps = 7/173 (4%)
 Frame = -3

Query: 500 STSAPHFLAPVDIKLNGSNYREWFTTVRIVLLGMDLLGHADGTSSQPSTPDA-------S 342
           +T     L  V ++L+G NY  W   +R  L G  + G+  GT   P   +        +
Sbjct: 2   ATERDDSLQSVSVRLDGKNYSYWSYVMRNFLKGKKMWGYVSGTYVVPKNTEEGDTVSIDT 61

Query: 341 WTLADRRTMTIICQSCEIDVRMEIGHLSTAHAMWEHLGHMFEHSSSARQYAILQDLTHIQ 162
           W   + + +T I    E  +  ++    TA  +W+HL  +F  S+ A+QY +  D+  + 
Sbjct: 62  WEANNAKIITWINNYVEHSIGTQLAKYETAKEVWDHLQRLFTQSNFAKQYQLENDIRALH 121

Query: 161 QRERSVREYVSDLRSLWRQIDSLEESXXXXXXXXXXXTQSRQIQRTFEFLMRL 3
           Q+  S++E+ S +  LW Q+ +L ES            + R+ QR  +FL  L
Sbjct: 122 QKNMSIQEFYSAMTDLWDQL-ALTES--VELKACGAYIERREQQRLVQFLTAL 171


Top