BLASTX nr result

ID: Dioscorea21_contig00036859 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00036859
         (383 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267998.1| PREDICTED: pentatricopeptide repeat-containi...   161   6e-38
emb|CAN62101.1| hypothetical protein VITISV_033310 [Vitis vinifera]   159   3e-37
gb|EAY75608.1| hypothetical protein OsI_03512 [Oryza sativa Indi...   154   5e-36
ref|NP_001044067.1| Os01g0715900 [Oryza sativa Japonica Group] g...   154   5e-36
ref|XP_002458407.1| hypothetical protein SORBIDRAFT_03g032890 [S...   153   2e-35

>ref|XP_002267998.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 618

 Score =  161 bits (407), Expect = 6e-38
 Identities = 75/121 (61%), Positives = 94/121 (77%)
 Frame = +2

Query: 2   NVVIWGTLLSACRVHSDVELAECSMNKLLVLEPDNSANYVLLSSIYADAGRWEEARKMRN 181
           NVVIWGTLLSA R+H +VELAE +  KLL LEPDNS NYV+LS+IYA AGRW+EA K+R 
Sbjct: 497 NVVIWGTLLSASRIHLNVELAELAGKKLLELEPDNSGNYVILSNIYASAGRWQEALKVRK 556

Query: 182 LMRRKDVQKVAGYSWIELDDTVHKFLVGDTFHPRCDDIYDVVDGLSLQLKWMDETTEYDQ 361
           LM+ K VQK A YSW+E++D VHKFLVGDT HPR D++Y  +DGL+L   W+    +++ 
Sbjct: 557 LMKDKRVQKAAAYSWVEVEDRVHKFLVGDTSHPRSDEVYSTIDGLALLSTWVGYELDFEI 616

Query: 362 E 364
           E
Sbjct: 617 E 617


>emb|CAN62101.1| hypothetical protein VITISV_033310 [Vitis vinifera]
          Length = 396

 Score =  159 bits (401), Expect = 3e-37
 Identities = 74/121 (61%), Positives = 93/121 (76%)
 Frame = +2

Query: 2   NVVIWGTLLSACRVHSDVELAECSMNKLLVLEPDNSANYVLLSSIYADAGRWEEARKMRN 181
           NVVIWGTLLSA R+H +VELAE +  KLL LEPDNS NYV+LS+IYA A RW+EA K+R 
Sbjct: 275 NVVIWGTLLSASRIHLNVELAELAGKKLLELEPDNSGNYVILSNIYASASRWQEALKVRK 334

Query: 182 LMRRKDVQKVAGYSWIELDDTVHKFLVGDTFHPRCDDIYDVVDGLSLQLKWMDETTEYDQ 361
           LM+ K VQK A YSW+E++D VHKFLVGDT HPR D++Y  +DGL+L   W+    +++ 
Sbjct: 335 LMKDKRVQKAAAYSWVEVEDRVHKFLVGDTSHPRSDEVYSTIDGLALLSTWVGYELDFEI 394

Query: 362 E 364
           E
Sbjct: 395 E 395


>gb|EAY75608.1| hypothetical protein OsI_03512 [Oryza sativa Indica Group]
          Length = 608

 Score =  154 bits (390), Expect = 5e-36
 Identities = 73/113 (64%), Positives = 93/113 (82%)
 Frame = +2

Query: 2   NVVIWGTLLSACRVHSDVELAECSMNKLLVLEPDNSANYVLLSSIYADAGRWEEARKMRN 181
           N VIW TLLSACR H+DVELA+ + +KLLVLEPDNS+ YVLLS+IYADAG W + R++R+
Sbjct: 485 NAVIWSTLLSACRAHADVELAKLAASKLLVLEPDNSSIYVLLSNIYADAGLWGDVREIRD 544

Query: 182 LMRRKDVQKVAGYSWIELDDTVHKFLVGDTFHPRCDDIYDVVDGLSLQLKWMD 340
           LMR K+VQK++ YSWIELD  VHKFLV DT+HP+  +I++VVDG+ L L  +D
Sbjct: 545 LMRSKNVQKLSAYSWIELDGEVHKFLVQDTYHPKSAEIFNVVDGMGLHLDDVD 597


>ref|NP_001044067.1| Os01g0715900 [Oryza sativa Japonica Group]
           gi|20160882|dbj|BAB89820.1| pentatricopeptide (PPR)
           repeat-containing protein-like [Oryza sativa Japonica
           Group] gi|113533598|dbj|BAF05981.1| Os01g0715900 [Oryza
           sativa Japonica Group] gi|125571815|gb|EAZ13330.1|
           hypothetical protein OsJ_03251 [Oryza sativa Japonica
           Group]
          Length = 608

 Score =  154 bits (390), Expect = 5e-36
 Identities = 73/113 (64%), Positives = 93/113 (82%)
 Frame = +2

Query: 2   NVVIWGTLLSACRVHSDVELAECSMNKLLVLEPDNSANYVLLSSIYADAGRWEEARKMRN 181
           N VIW TLLSACR H+DVELA+ + +KLLVLEPDNS+ YVLLS+IYADAG W + R++R+
Sbjct: 485 NAVIWSTLLSACRAHADVELAKLAASKLLVLEPDNSSIYVLLSNIYADAGLWGDVREIRD 544

Query: 182 LMRRKDVQKVAGYSWIELDDTVHKFLVGDTFHPRCDDIYDVVDGLSLQLKWMD 340
           LMR K+VQK++ YSWIELD  VHKFLV DT+HP+  +I++VVDG+ L L  +D
Sbjct: 545 LMRSKNVQKLSAYSWIELDGEVHKFLVQDTYHPKSAEIFNVVDGMGLHLDDVD 597


>ref|XP_002458407.1| hypothetical protein SORBIDRAFT_03g032890 [Sorghum bicolor]
           gi|241930382|gb|EES03527.1| hypothetical protein
           SORBIDRAFT_03g032890 [Sorghum bicolor]
          Length = 695

 Score =  153 bits (386), Expect = 2e-35
 Identities = 75/122 (61%), Positives = 95/122 (77%)
 Frame = +2

Query: 2   NVVIWGTLLSACRVHSDVELAECSMNKLLVLEPDNSANYVLLSSIYADAGRWEEARKMRN 181
           N VIW TLLSACR H+DVELA+ +  KL+ LEP+NS+ YVLLS+IYADAG W + R++R+
Sbjct: 574 NAVIWSTLLSACRAHADVELAKLAAGKLVALEPNNSSIYVLLSNIYADAGLWGDVREIRD 633

Query: 182 LMRRKDVQKVAGYSWIELDDTVHKFLVGDTFHPRCDDIYDVVDGLSLQLKWMDETTEYDQ 361
           LMR K++QK++ YSWIELD  VH+FLV DT+HPR  +IY+VVDGL LQL    E T  D 
Sbjct: 634 LMRSKNLQKLSAYSWIELDGEVHRFLVQDTYHPRSAEIYNVVDGLGLQL----ERTSPDH 689

Query: 362 EV 367
           E+
Sbjct: 690 EL 691


Top