BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00036837
         (611 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001151863.1| rf1 protein [Zea mays] gi|195650381|gb|ACG44...   174   1e-41
ref|XP_002283237.1| PREDICTED: putative pentatricopeptide repeat...   173   2e-41
gb|ACF84015.1| unknown [Zea mays] gi|414886155|tpg|DAA62169.1| T...   170   2e-40
ref|XP_003566429.1| PREDICTED: putative pentatricopeptide repeat...   168   8e-40
emb|CAN64120.1| hypothetical protein VITISV_037241 [Vitis vinifera]   166   3e-39

>ref|NP_001151863.1| rf1 protein [Zea mays] gi|195650381|gb|ACG44658.1| rf1 protein [Zea
           mays]
          Length = 467

 Score =  174 bits (440), Expect = 1e-41
 Identities = 96/186 (51%), Positives = 117/186 (62%), Gaps = 4/186 (2%)
 Frame = -1

Query: 548 PDACTYNILLRACT---SLHDARTLFDEMRERNQVTWNVMISGYNQYVCADLKFDDAFMV 378
           PDACTYNIL+RA     SL  AR LFDEM  R      V        +CA  + +DAF V
Sbjct: 154 PDACTYNILMRAAAASGSLGHARHLFDEMLRRGIAPTVVTFGTLVAALCAAGQLEDAFEV 213

Query: 377 KDEMLKSFDIKPNVYIYTSLIXXXXXXXXXXXXXXXXXXXXLDQALTLDSAVYSTIIRAL 198
           K+ M++ + + PNVY+YTSLI                        L LDSAVY+T++RAL
Sbjct: 214 KEVMVRQYHVLPNVYVYTSLIKGLCEKGDVDAAMALKEEMAGKADLVLDSAVYATLVRAL 273

Query: 197 FRVGRKGEVVGILEEMKANGVKPDTVTYNAMIAGFCE-EKEFDAVFEALNEMEKNGCKAD 21
           F+VGRKG VVG+LEEMK +GV  DTV YNAM+AGFCE EK+  A F  L++M+KNGCKAD
Sbjct: 274 FQVGRKGAVVGLLEEMKGSGVVADTVVYNAMLAGFCEDEKDLAAAFAVLDDMQKNGCKAD 333

Query: 20  VVSYNT 3
            VSYNT
Sbjct: 334 AVSYNT 339


>ref|XP_002283237.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g53330-like [Vitis vinifera]
          Length = 464

 Score =  173 bits (439), Expect = 2e-41
 Identities = 91/189 (48%), Positives = 121/189 (64%), Gaps = 7/189 (3%)
 Frame = -1

Query: 551 TPDACTYNILLRACTS---LHDARTLFDEMRER----NQVTWNVMISGYNQYVCADLKFD 393
           TPD CTYN+L+ AC S   L DA  +FDEM  +    N VT+  +ISG    +C D + D
Sbjct: 145 TPDVCTYNVLINACCSSGSLGDAWNVFDEMLRKHVCPNVVTFGTLISG----LCGDSRLD 200

Query: 392 DAFMVKDEMLKSFDIKPNVYIYTSLIXXXXXXXXXXXXXXXXXXXXLDQALTLDSAVYST 213
           +AF +K++M+K F++KPN ++Y SL+                     ++ L LDS +YST
Sbjct: 201 EAFRLKEDMVKVFNVKPNAFVYASLMKGLCRVNELSLAFELKKEMVANK-LRLDSGIYST 259

Query: 212 IIRALFRVGRKGEVVGILEEMKANGVKPDTVTYNAMIAGFCEEKEFDAVFEALNEMEKNG 33
           +I ALF+VGRK EV  +LEEM+ NG KPDTVTYNAMI+GFC EK+F+A +  L EM   G
Sbjct: 260 LIAALFKVGRKDEVFVVLEEMRENGCKPDTVTYNAMISGFCNEKDFEAAYGVLEEMVAKG 319

Query: 32  CKADVVSYN 6
           CK DV+SYN
Sbjct: 320 CKPDVISYN 328


>gb|ACF84015.1| unknown [Zea mays] gi|414886155|tpg|DAA62169.1| TPA: rf1 protein
           [Zea mays]
          Length = 456

 Score =  170 bits (431), Expect = 2e-40
 Identities = 94/186 (50%), Positives = 116/186 (62%), Gaps = 4/186 (2%)
 Frame = -1

Query: 548 PDACTYNILLRACT---SLHDARTLFDEMRERNQVTWNVMISGYNQYVCADLKFDDAFMV 378
           PDACTYNIL+RA     SL  AR +FDEM  R      V        +CA  + + AF V
Sbjct: 143 PDACTYNILMRAAAASGSLAHARHMFDEMLRRGIAPTVVTFGTLVAALCAAGQLEGAFEV 202

Query: 377 KDEMLKSFDIKPNVYIYTSLIXXXXXXXXXXXXXXXXXXXXLDQALTLDSAVYSTIIRAL 198
           K+ M++ + + PNVY+YTSLI                        L LDSAVY+T++RAL
Sbjct: 203 KEVMVRQYHVLPNVYVYTSLIKGLCEKGDVDAAVALKEEMAGKADLVLDSAVYATLVRAL 262

Query: 197 FRVGRKGEVVGILEEMKANGVKPDTVTYNAMIAGFCE-EKEFDAVFEALNEMEKNGCKAD 21
           F+VGRKG VVG+LEEMK +GV  DTV YNAM+AGFCE EK+  A F  L++M+KNGCKAD
Sbjct: 263 FQVGRKGAVVGLLEEMKGSGVVADTVVYNAMLAGFCEDEKDLAAAFAVLDDMQKNGCKAD 322

Query: 20  VVSYNT 3
            VSYNT
Sbjct: 323 AVSYNT 328


>ref|XP_003566429.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g53330-like [Brachypodium distachyon]
          Length = 461

 Score =  168 bits (425), Expect = 8e-40
 Identities = 89/192 (46%), Positives = 124/192 (64%), Gaps = 8/192 (4%)
 Frame = -1

Query: 554 VTPDACTYNILLRACT---SLHDARTLFDEMRERN----QVTWNVMISGYNQYVCADLKF 396
           V+PDACTYNIL+RA     S+  AR LFDEM +R      VT+  +++ +    C+  + 
Sbjct: 145 VSPDACTYNILMRAAAASGSVDHARLLFDEMVQRRIAPTVVTFGTLVAAF----CSSGRL 200

Query: 395 DDAFMVKDEMLKSFDIKPNVYIYTSLIXXXXXXXXXXXXXXXXXXXXLDQALTLDSAVYS 216
           D+AF +K+ M + ++++PN ++Y SL+                     +  L LDSA+Y+
Sbjct: 201 DEAFDLKEAMARQYNVRPNAHVYASLMKGLCQSGDADNAVRLKEEMAGNAELGLDSAIYA 260

Query: 215 TIIRALFRVGRKGEVVGILEEMKANGVKPDTVTYNAMIAGFCE-EKEFDAVFEALNEMEK 39
           T++RALFRVGRKGEVVG+LEEMK  G+  D V +NAMIAGFCE E + DA F  L++M+K
Sbjct: 261 TLVRALFRVGRKGEVVGLLEEMKGRGIAVDRVVHNAMIAGFCEDEMDLDAAFVVLDDMQK 320

Query: 38  NGCKADVVSYNT 3
           +GCKAD VSYNT
Sbjct: 321 SGCKADTVSYNT 332


>emb|CAN64120.1| hypothetical protein VITISV_037241 [Vitis vinifera]
          Length = 418

 Score =  166 bits (420), Expect = 3e-39
 Identities = 89/189 (47%), Positives = 119/189 (62%), Gaps = 7/189 (3%)
 Frame = -1

Query: 551 TPDACTYNILLRACT---SLHDARTLFDEMRER----NQVTWNVMISGYNQYVCADLKFD 393
           TP+ CTYNIL+ AC     L DA  +FDEM  +    N VT+  +ISG    +C D + D
Sbjct: 145 TPNVCTYNILINACCLSGRLGDAWNVFDEMLRKHVCPNVVTFGTLISG----LCRDSRLD 200

Query: 392 DAFMVKDEMLKSFDIKPNVYIYTSLIXXXXXXXXXXXXXXXXXXXXLDQALTLDSAVYST 213
           +A  +K++M+K F++KPN ++Y SL+                     ++ L LDS +YST
Sbjct: 201 EASRLKEDMVKVFNVKPNAFVYASLMKGLCRVNELSLAFELKKEMVANK-LRLDSGIYST 259

Query: 212 IIRALFRVGRKGEVVGILEEMKANGVKPDTVTYNAMIAGFCEEKEFDAVFEALNEMEKNG 33
           +I ALF+VGRK EV  +LEEM+ NG KPDTVTYNAMI+GFC EK+F+A +  L EM   G
Sbjct: 260 LIAALFKVGRKDEVFVVLEEMRENGCKPDTVTYNAMISGFCNEKDFEAAYGVLEEMVVKG 319

Query: 32  CKADVVSYN 6
           CK DV+SYN
Sbjct: 320 CKPDVISYN 328