BLASTX nr result

ID: Dioscorea21_contig00036834 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00036834
         (263 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003571484.1| PREDICTED: ABC transporter B family member 1...   149   3e-34
gb|ACF22786.1| MDR-like ABC transporter [Brachypodium distachyon]     149   3e-34
ref|XP_002443864.1| hypothetical protein SORBIDRAFT_07g003510 [S...   148   5e-34
dbj|BAC99416.1| putative MDR-like ABC transporter [Oryza sativa ...   145   3e-33
emb|CAD59579.1| MDR-like ABC transporter [Oryza sativa Japonica ...   145   3e-33

>ref|XP_003571484.1| PREDICTED: ABC transporter B family member 14-like, partial
            [Brachypodium distachyon]
          Length = 1230

 Score =  149 bits (375), Expect = 3e-34
 Identities = 67/87 (77%), Positives = 85/87 (97%)
 Frame = -2

Query: 262  FVYEEQILAKAKVAVKEPMKISRIESVKYGIIQGVSLCLWNIAHAVALWYTTVLVKKEQA 83
            FVYE++I+ KA+++++EPM+I+RIES+KYG+IQG+SLCLWNIAHAVALWYTTVLV+++QA
Sbjct: 854  FVYEDEIIKKAELSLQEPMRITRIESMKYGVIQGISLCLWNIAHAVALWYTTVLVQRKQA 913

Query: 82   TFKDGIRSYQIFSLTVPSITELWTLIP 2
            TF++ IRSYQIFSLTVPSITELWTLIP
Sbjct: 914  TFENSIRSYQIFSLTVPSITELWTLIP 940


>gb|ACF22786.1| MDR-like ABC transporter [Brachypodium distachyon]
          Length = 1269

 Score =  149 bits (375), Expect = 3e-34
 Identities = 67/87 (77%), Positives = 85/87 (97%)
 Frame = -2

Query: 262  FVYEEQILAKAKVAVKEPMKISRIESVKYGIIQGVSLCLWNIAHAVALWYTTVLVKKEQA 83
            FVYE++I+ KA+++++EPM+I+RIES+KYG+IQG+SLCLWNIAHAVALWYTTVLV+++QA
Sbjct: 893  FVYEDEIIKKAELSLQEPMRITRIESMKYGVIQGISLCLWNIAHAVALWYTTVLVQRKQA 952

Query: 82   TFKDGIRSYQIFSLTVPSITELWTLIP 2
            TF++ IRSYQIFSLTVPSITELWTLIP
Sbjct: 953  TFENSIRSYQIFSLTVPSITELWTLIP 979


>ref|XP_002443864.1| hypothetical protein SORBIDRAFT_07g003510 [Sorghum bicolor]
            gi|241940214|gb|EES13359.1| hypothetical protein
            SORBIDRAFT_07g003510 [Sorghum bicolor]
          Length = 1237

 Score =  148 bits (373), Expect = 5e-34
 Identities = 66/87 (75%), Positives = 85/87 (97%)
 Frame = -2

Query: 262  FVYEEQILAKAKVAVKEPMKISRIESVKYGIIQGVSLCLWNIAHAVALWYTTVLVKKEQA 83
            FVYE++I+ KA+++++EP+KI++IES+KYG+IQG+SLCLWNIAHAVALWYTTVLV+++QA
Sbjct: 861  FVYEDEIIKKAELSLQEPLKITKIESMKYGVIQGISLCLWNIAHAVALWYTTVLVQRKQA 920

Query: 82   TFKDGIRSYQIFSLTVPSITELWTLIP 2
            +F+D IRSYQIFSLTVPSITELWTLIP
Sbjct: 921  SFEDSIRSYQIFSLTVPSITELWTLIP 947


>dbj|BAC99416.1| putative MDR-like ABC transporter [Oryza sativa Japonica Group]
            gi|37806247|dbj|BAC99764.1| putative MDR-like ABC
            transporter [Oryza sativa Japonica Group]
            gi|222639927|gb|EEE68059.1| hypothetical protein
            OsJ_26065 [Oryza sativa Japonica Group]
          Length = 1261

 Score =  145 bits (366), Expect = 3e-33
 Identities = 63/87 (72%), Positives = 85/87 (97%)
 Frame = -2

Query: 262  FVYEEQILAKAKVAVKEPMKISRIESVKYGIIQGVSLCLWNIAHAVALWYTTVLVKKEQA 83
            FVYE++I+ KA+++++EPM++++IES+KYG++QG+SLCLWNIAHAVALWYTTVLV+++QA
Sbjct: 885  FVYEDEIIKKAELSLQEPMRVTKIESMKYGVVQGISLCLWNIAHAVALWYTTVLVQRKQA 944

Query: 82   TFKDGIRSYQIFSLTVPSITELWTLIP 2
            +F++ IRSYQIFSLTVPSITELWTLIP
Sbjct: 945  SFENSIRSYQIFSLTVPSITELWTLIP 971


>emb|CAD59579.1| MDR-like ABC transporter [Oryza sativa Japonica Group]
          Length = 1242

 Score =  145 bits (366), Expect = 3e-33
 Identities = 63/87 (72%), Positives = 85/87 (97%)
 Frame = -2

Query: 262  FVYEEQILAKAKVAVKEPMKISRIESVKYGIIQGVSLCLWNIAHAVALWYTTVLVKKEQA 83
            FVYE++I+ KA+++++EPM++++IES+KYG++QG+SLCLWNIAHAVALWYTTVLV+++QA
Sbjct: 866  FVYEDEIIKKAELSLQEPMRVTKIESMKYGVVQGISLCLWNIAHAVALWYTTVLVQRKQA 925

Query: 82   TFKDGIRSYQIFSLTVPSITELWTLIP 2
            +F++ IRSYQIFSLTVPSITELWTLIP
Sbjct: 926  SFENSIRSYQIFSLTVPSITELWTLIP 952


Top