BLASTX nr result

ID: Dioscorea21_contig00036823 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00036823
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297781.1| predicted protein [Populus trichocarpa] gi|2...    57   1e-06
ref|XP_002513472.1| sorting and assembly machinery (sam50) prote...    55   5e-06

>ref|XP_002297781.1| predicted protein [Populus trichocarpa] gi|222845039|gb|EEE82586.1|
           predicted protein [Populus trichocarpa]
          Length = 512

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 24/33 (72%), Positives = 30/33 (90%)
 Frame = +1

Query: 1   GKIVNIRRLDEVINSINGWYIERGLFGLVGASQ 99
           GK+VNI+ LDEVINSINGWY+ERGLFG+V  ++
Sbjct: 48  GKVVNIKHLDEVINSINGWYMERGLFGMVSNAE 80


>ref|XP_002513472.1| sorting and assembly machinery (sam50) protein, putative [Ricinus
           communis] gi|223547380|gb|EEF48875.1| sorting and
           assembly machinery (sam50) protein, putative [Ricinus
           communis]
          Length = 700

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 24/29 (82%), Positives = 27/29 (93%)
 Frame = +1

Query: 1   GKIVNIRRLDEVINSINGWYIERGLFGLV 87
           GK+VNIR LD+VI SINGWY+ERGLFGLV
Sbjct: 236 GKVVNIRHLDDVITSINGWYMERGLFGLV 264


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