BLASTX nr result

ID: Dioscorea21_contig00036822 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00036822
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004158293.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...    74   2e-11
ref|XP_004144264.1| PREDICTED: putative pentatricopeptide repeat...    74   2e-11
ref|XP_003549152.1| PREDICTED: pentatricopeptide repeat-containi...    69   5e-10
ref|XP_003619586.1| hypothetical protein MTR_6g059820 [Medicago ...    69   5e-10
ref|XP_002282781.2| PREDICTED: pentatricopeptide repeat-containi...    68   7e-10

>ref|XP_004158293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g69350, mitochondrial-like
           [Cucumis sativus]
          Length = 804

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 34/60 (56%), Positives = 42/60 (70%)
 Frame = -1

Query: 326 HSACIVDLLSRAGYVDRAFDLIKSMQIEPNASLWRTLLNGCYIHQRLDTAEAIQKRFLEI 147
           H  CIVDLLSRAG +D A+++IK M   P AS+W  LLNGC IHQR+D A+ IQ+    I
Sbjct: 641 HFVCIVDLLSRAGDLDEAYEIIKLMPFPPGASIWGALLNGCRIHQRMDIAKNIQRELWNI 700


>ref|XP_004144264.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g69350, mitochondrial-like [Cucumis sativus]
          Length = 804

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 34/60 (56%), Positives = 42/60 (70%)
 Frame = -1

Query: 326 HSACIVDLLSRAGYVDRAFDLIKSMQIEPNASLWRTLLNGCYIHQRLDTAEAIQKRFLEI 147
           H  CIVDLLSRAG +D A+++IK M   P AS+W  LLNGC IHQR+D A+ IQ+    I
Sbjct: 641 HFVCIVDLLSRAGDLDEAYEIIKLMPFPPGASIWGALLNGCRIHQRMDIAKNIQRELWNI 700


>ref|XP_003549152.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g33350-like [Glycine max]
          Length = 522

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 29/60 (48%), Positives = 40/60 (66%)
 Frame = -1

Query: 326 HSACIVDLLSRAGYVDRAFDLIKSMQIEPNASLWRTLLNGCYIHQRLDTAEAIQKRFLEI 147
           H  C++DLL RAG  D A D++K M +EP+  +W +LLNGC +H R D AE   K+ +EI
Sbjct: 378 HYGCLIDLLGRAGRFDEAMDVVKGMSMEPDEVVWGSLLNGCKVHGRTDLAEFAAKKLIEI 437


>ref|XP_003619586.1| hypothetical protein MTR_6g059820 [Medicago truncatula]
           gi|355494601|gb|AES75804.1| hypothetical protein
           MTR_6g059820 [Medicago truncatula]
          Length = 528

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 29/60 (48%), Positives = 40/60 (66%)
 Frame = -1

Query: 326 HSACIVDLLSRAGYVDRAFDLIKSMQIEPNASLWRTLLNGCYIHQRLDTAEAIQKRFLEI 147
           H  C++DLL RAG  D A D++K M +EP+  +W +LLNGC +H R D AE   K+ +EI
Sbjct: 384 HYGCLIDLLGRAGQFDEAMDVVKGMSMEPDEVVWGSLLNGCKVHGRTDLAEFAAKKLVEI 443


>ref|XP_002282781.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g04860-like [Vitis vinifera]
          Length = 724

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 28/58 (48%), Positives = 42/58 (72%)
 Frame = -1

Query: 326 HSACIVDLLSRAGYVDRAFDLIKSMQIEPNASLWRTLLNGCYIHQRLDTAEAIQKRFL 153
           H+AC+VDLLSRAG+++ A   +K+M++EP++++W  LL  C IHQ L   E + KR L
Sbjct: 590 HNACMVDLLSRAGFLEEAVIFVKNMEVEPDSAIWGALLTSCCIHQELKLGECLAKRLL 647


Top