BLASTX nr result

ID: Dioscorea21_contig00036816 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00036816
         (470 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002440775.1| hypothetical protein SORBIDRAFT_09g006400 [S...   149   2e-34
gb|AFW81624.1| hypothetical protein ZEAMMB73_313891 [Zea mays]        144   6e-33
ref|XP_003566435.1| PREDICTED: uncharacterized protein C2F7.02c-...   143   1e-32
gb|ADN34024.1| carboxy-terminal domain RNA polymerase II polypep...   132   2e-29
ref|XP_004163350.1| PREDICTED: CTD small phosphatase-like protei...   132   3e-29

>ref|XP_002440775.1| hypothetical protein SORBIDRAFT_09g006400 [Sorghum bicolor]
           gi|241946060|gb|EES19205.1| hypothetical protein
           SORBIDRAFT_09g006400 [Sorghum bicolor]
          Length = 319

 Score =  149 bits (376), Expect = 2e-34
 Identities = 79/170 (46%), Positives = 106/170 (62%), Gaps = 14/170 (8%)
 Frame = +3

Query: 3   PKHHQRRRKKSPLKXXXXXXXXXXXXIDRSLRSCRRHLLKLFTRLAVLGTPTKLPRKPGG 182
           P    +RR+ SPLK             DRS+R+CRR LLKLF RLAVLG+P K      G
Sbjct: 45  PATATKRRRGSPLKSLASAPAAVAASFDRSIRTCRRRLLKLFARLAVLGSPRKRRAAAAG 104

Query: 183 YRRLTPLSDEPLLYPLENTT--------------NERKKTIILDLDETLVHSQTDPPPAK 320
           ++RL   S  P   PL +                +  ++T+ LDLDETL+HSQTDPPP++
Sbjct: 105 FQRLRSSSTPPPPPPLPSQNPAVRAQSAALPPPPSPGRRTLFLDLDETLIHSQTDPPPSR 164

Query: 321 YDFTVHPMIDGRSITVNVLKRPGVDEFLKAISKSFEAVIFTAGLKEYASL 470
           +DFTV P+I G ++T  V+KRPGV+ FL+A ++ F+ V+FTAGL+EYASL
Sbjct: 165 FDFTVRPVIGGHAVTFYVVKRPGVEAFLRAAAEIFDVVVFTAGLQEYASL 214


>gb|AFW81624.1| hypothetical protein ZEAMMB73_313891 [Zea mays]
          Length = 322

 Score =  144 bits (364), Expect = 6e-33
 Identities = 78/167 (46%), Positives = 104/167 (62%), Gaps = 17/167 (10%)
 Frame = +3

Query: 21  RRKKSPLKXXXXXXXXXXXXIDRSLRSCRRHLLKLFTRLAVLGTPTKLPRKPGGYRRLT- 197
           +R+ SPLK             DRS+RSCRR LLKLF RLAVLG+  K      G++RL  
Sbjct: 51  KRRGSPLKSLASAPTAVAASFDRSIRSCRRRLLKLFARLAVLGSSRKRRAASAGFQRLRS 110

Query: 198 ----PLSDEPLLYPLENTT------------NERKKTIILDLDETLVHSQTDPPPAKYDF 329
               P    PL  P +N              +  ++T+ LDLDETL+HSQT+PPP+++DF
Sbjct: 111 SSAPPPPPPPLPLPSQNPAVRAQSAALPPPPSPGRRTLFLDLDETLIHSQTEPPPSRFDF 170

Query: 330 TVHPMIDGRSITVNVLKRPGVDEFLKAISKSFEAVIFTAGLKEYASL 470
           TV P+I G ++T  V+KRPGV+ FL+A + +FE V+FTAGL+EYASL
Sbjct: 171 TVRPVIGGHAVTFYVVKRPGVEAFLRAAADAFEVVVFTAGLQEYASL 217


>ref|XP_003566435.1| PREDICTED: uncharacterized protein C2F7.02c-like [Brachypodium
           distachyon]
          Length = 302

 Score =  143 bits (361), Expect = 1e-32
 Identities = 85/176 (48%), Positives = 106/176 (60%), Gaps = 20/176 (11%)
 Frame = +3

Query: 3   PKHHQRRRKK----SPLKXXXXXXXXXXXXIDRSLRSCRRHLLKLFTRLAVLGTPTKLPR 170
           P    RRRK     SPLK            +  S+R CRR LLKLF RL +LG+P K   
Sbjct: 26  PTPAARRRKAFRGGSPLKSLAAAPAA----VASSVRFCRRRLLKLFARLTILGSPAKRRA 81

Query: 171 KPGGYRRLT----PLSDEPLLYPLENTTNE------------RKKTIILDLDETLVHSQT 302
              G++RL     P + +PLL P     N              KKT+ LDLDETL+HSQT
Sbjct: 82  AAAGFQRLRSIPLPPTPKPLLSPRAQRQNRVHATALPPPPEPGKKTLFLDLDETLIHSQT 141

Query: 303 DPPPAKYDFTVHPMIDGRSITVNVLKRPGVDEFLKAISKSFEAVIFTAGLKEYASL 470
           DP PA+YDFTV P+I G++IT  V KRPGVDEFL+A +++FE V+FTAGL++YASL
Sbjct: 142 DPVPARYDFTVRPVIGGQAITFYVTKRPGVDEFLRAAAEAFEVVVFTAGLEQYASL 197


>gb|ADN34024.1| carboxy-terminal domain RNA polymerase II polypeptide a small
           phosphatase [Cucumis melo subsp. melo]
          Length = 275

 Score =  132 bits (333), Expect = 2e-29
 Identities = 81/174 (46%), Positives = 103/174 (59%), Gaps = 18/174 (10%)
 Frame = +3

Query: 3   PKHHQRR-RKKSPLKXXXXXXXXXXXXIDRSLRSCRRHLLKLFTRLAVLGTPTKLPRKPG 179
           P H  RR R+KSP+K            I+RSL +C R LLK+F++LA + TP +      
Sbjct: 10  PTHPFRRHRRKSPIKNASSAVVAT---INRSLYTCHRRLLKIFSKLARISTPNRHK---- 62

Query: 180 GYRRLTPLS-----------------DEPLLYPLENTTNERKKTIILDLDETLVHSQTDP 308
           GY+ L   S                 D  LL PL    +  K+T++LDLDETLVHS+ DP
Sbjct: 63  GYKSLRKTSSSSSSSSESDIVRTLVFDNRLLPPL---ISPAKRTVLLDLDETLVHSKLDP 119

Query: 309 PPAKYDFTVHPMIDGRSITVNVLKRPGVDEFLKAISKSFEAVIFTAGLKEYASL 470
           PP K+DF V P IDG  +   VLKRPGVD+FL+A++  FE V+FTAGLKEYASL
Sbjct: 120 PPKKFDFVVRPRIDGEILNFYVLKRPGVDQFLEALADKFEIVVFTAGLKEYASL 173


>ref|XP_004163350.1| PREDICTED: CTD small phosphatase-like protein-like [Cucumis
           sativus]
          Length = 273

 Score =  132 bits (332), Expect = 3e-29
 Identities = 76/172 (44%), Positives = 101/172 (58%), Gaps = 20/172 (11%)
 Frame = +3

Query: 15  QRRRKKSPLKXXXXXXXXXXXXIDRSLRSCRRHLLKLFTRLAVLGTPTKLPRKPGGYRRL 194
           +R R+KSP+K            I+RSL +C R LLK+F++LA + TP +      GY+ L
Sbjct: 15  RRHRRKSPIKNAPSAVVAT---INRSLYTCHRRLLKIFSKLARISTPNRHK----GYKSL 67

Query: 195 TPLSDE--------------------PLLYPLENTTNERKKTIILDLDETLVHSQTDPPP 314
              +                      PL+YP        K+T++LDLDETLVHS+ DPPP
Sbjct: 68  RKTNSSSSESEPDIVRTLVFDNRLLPPLIYPA-------KRTVLLDLDETLVHSKLDPPP 120

Query: 315 AKYDFTVHPMIDGRSITVNVLKRPGVDEFLKAISKSFEAVIFTAGLKEYASL 470
           AK+DF V P IDG  +   VLKRPGVD+FL+A++  +E V+FTAGLKEYASL
Sbjct: 121 AKFDFVVRPRIDGEVLNFYVLKRPGVDQFLEALADKYEIVVFTAGLKEYASL 172


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