BLASTX nr result

ID: Dioscorea21_contig00036799 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00036799
         (528 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001109553.1| hypothetical protein Poptr_cp075 [Populus tr...    59   1e-15

>ref|YP_001109553.1| hypothetical protein Poptr_cp075 [Populus trichocarpa]
           gi|134093265|ref|YP_001109566.1| hypothetical protein
           Poptr_cp088 [Populus trichocarpa]
           gi|133712114|gb|ABO36757.1| hypothetical protein
           Poptr_cp075 [Populus trichocarpa]
           gi|133712127|gb|ABO36770.1| hypothetical protein
           Poptr_cp088 [Populus trichocarpa]
          Length = 86

 Score = 58.9 bits (141), Expect(2) = 1e-15
 Identities = 29/43 (67%), Positives = 33/43 (76%)
 Frame = -1

Query: 171 KDERKAYWLVIVRPQFLTGRDTKGLWPFISLE*IEKEGGHCKW 43
           + ERKAYWLVIVRPQFLTG DTKGL P  S+  I++EGG   W
Sbjct: 21  RHERKAYWLVIVRPQFLTGGDTKGLCP--SITWIDREGGRSFW 61



 Score = 48.9 bits (115), Expect(2) = 1e-15
 Identities = 20/25 (80%), Positives = 21/25 (84%)
 Frame = -2

Query: 230 MDWCGSSTPRTPEYRIINEERMREK 156
           MDWCGSSTPRTPEYR +NEER   K
Sbjct: 1   MDWCGSSTPRTPEYRTMNEERHERK 25


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