BLASTX nr result

ID: Dioscorea21_contig00036765 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00036765
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316485.1| predicted protein [Populus trichocarpa] gi|2...   115   4e-24
ref|XP_002310995.1| predicted protein [Populus trichocarpa] gi|2...   114   8e-24
ref|NP_194721.1| heat shock protein-relatedlike protein [Arabido...   112   3e-23
ref|XP_003518191.1| PREDICTED: uncharacterized protein LOC100807...   110   9e-23
ref|XP_002516629.1| conserved hypothetical protein [Ricinus comm...   110   9e-23

>ref|XP_002316485.1| predicted protein [Populus trichocarpa] gi|222865525|gb|EEF02656.1|
           predicted protein [Populus trichocarpa]
          Length = 854

 Score =  115 bits (288), Expect = 4e-24
 Identities = 62/85 (72%), Positives = 70/85 (82%), Gaps = 4/85 (4%)
 Frame = -2

Query: 245 MRTGI--VQQALTPEAASALKQSLNLAKRRGHAQVTPLHVATTLLVSSKDTANLLRRACL 72
           MR GI  VQQALTPEA S +KQ++ LA+RRGHAQVTPLHVA+T+L SS     LLRRACL
Sbjct: 1   MRAGICSVQQALTPEAVSLVKQAVGLARRRGHAQVTPLHVASTMLASS---TGLLRRACL 57

Query: 71  --HSHPLHCRALELCFNVALNRLPS 3
             HSHPL C+ALELCFNVALNRLP+
Sbjct: 58  QSHSHPLQCKALELCFNVALNRLPA 82


>ref|XP_002310995.1| predicted protein [Populus trichocarpa] gi|222850815|gb|EEE88362.1|
           predicted protein [Populus trichocarpa]
          Length = 726

 Score =  114 bits (285), Expect = 8e-24
 Identities = 61/85 (71%), Positives = 70/85 (82%), Gaps = 4/85 (4%)
 Frame = -2

Query: 245 MRTGI--VQQALTPEAASALKQSLNLAKRRGHAQVTPLHVATTLLVSSKDTANLLRRACL 72
           MR GI  VQQ LTPEA S +KQ+++LA+RRGHAQVTPLHVA+T+L SS     LLRRACL
Sbjct: 1   MRAGICSVQQTLTPEAVSLVKQAVSLARRRGHAQVTPLHVASTMLASS---TGLLRRACL 57

Query: 71  --HSHPLHCRALELCFNVALNRLPS 3
             HSHPL C+ALELCFNVALNRLP+
Sbjct: 58  QAHSHPLQCKALELCFNVALNRLPA 82


>ref|NP_194721.1| heat shock protein-relatedlike protein [Arabidopsis thaliana]
           gi|4914416|emb|CAB43667.1| putative protein [Arabidopsis
           thaliana] gi|7269891|emb|CAB79750.1| putative protein
           [Arabidopsis thaliana] gi|332660293|gb|AEE85693.1| heat
           shock protein-relatedlike protein [Arabidopsis thaliana]
          Length = 1017

 Score =  112 bits (280), Expect = 3e-23
 Identities = 63/95 (66%), Positives = 71/95 (74%), Gaps = 14/95 (14%)
 Frame = -2

Query: 245 MRTGI--VQQALTPEAASALKQSLNLAKRRGHAQVTPLHVATTLLVSSKDTANLLRRACL 72
           MRTG   V Q LTPEAAS LKQSL LA+RRGH+QVTPLHVA+TLL SS+  +NL RRACL
Sbjct: 1   MRTGAYTVHQTLTPEAASVLKQSLTLARRRGHSQVTPLHVASTLLTSSR--SNLFRRACL 58

Query: 71  HSHP------------LHCRALELCFNVALNRLPS 3
            S+P            LHCRALELCFNV+LNRLP+
Sbjct: 59  KSNPFTALGRQMAHPSLHCRALELCFNVSLNRLPT 93


>ref|XP_003518191.1| PREDICTED: uncharacterized protein LOC100807485 [Glycine max]
          Length = 867

 Score =  110 bits (276), Expect = 9e-23
 Identities = 61/85 (71%), Positives = 67/85 (78%), Gaps = 4/85 (4%)
 Frame = -2

Query: 245 MRTG--IVQQALTPEAASALKQSLNLAKRRGHAQVTPLHVATTLLVSSKDTANLLRRACL 72
           MRTG   VQQ LTPEAAS +KQ++ LAKRRGHAQVTPLHVA T+L     T  LLR ACL
Sbjct: 1   MRTGSCAVQQGLTPEAASIVKQAVTLAKRRGHAQVTPLHVANTML---SITNGLLRTACL 57

Query: 71  --HSHPLHCRALELCFNVALNRLPS 3
             HSHPL C+ALELCFNVALNRLP+
Sbjct: 58  QSHSHPLQCKALELCFNVALNRLPA 82


>ref|XP_002516629.1| conserved hypothetical protein [Ricinus communis]
           gi|223544231|gb|EEF45753.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 864

 Score =  110 bits (276), Expect = 9e-23
 Identities = 60/85 (70%), Positives = 70/85 (82%), Gaps = 4/85 (4%)
 Frame = -2

Query: 245 MRTGI--VQQALTPEAASALKQSLNLAKRRGHAQVTPLHVATTLLVSSKDTANLLRRACL 72
           MR GI  VQQALT EAA+ +KQ+++LA+RRGHAQVTPLHVA+ +L S   T  LLRRACL
Sbjct: 1   MRAGICSVQQALTAEAANIVKQAVSLARRRGHAQVTPLHVASAMLAS---TNGLLRRACL 57

Query: 71  --HSHPLHCRALELCFNVALNRLPS 3
             HSHPL C+ALELCFNVALNRLP+
Sbjct: 58  QSHSHPLQCKALELCFNVALNRLPA 82


Top