BLASTX nr result

ID: Dioscorea21_contig00036759 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00036759
         (406 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550361.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g...    71   8e-11
ref|XP_003589308.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    70   1e-10
ref|XP_003589307.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    70   1e-10
ref|XP_003588676.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    70   2e-10
ref|XP_003518816.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g...    67   2e-09

>ref|XP_003550361.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Glycine
           max]
          Length = 427

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 38/72 (52%), Positives = 48/72 (66%), Gaps = 5/72 (6%)
 Frame = +3

Query: 183 KILEHLPIRDAVRTSVLSTKWRYVWASLPKLVFDEHKFM-----HDRINFRFSESVDRVL 347
           ++L HL IR+AVRTSVLS+KWRY WA+LP LVFD H        H  I  +    +D VL
Sbjct: 29  QVLSHLSIREAVRTSVLSSKWRYKWATLPILVFDTHCVSVASQDHMIIKNKLLRIIDHVL 88

Query: 348 LLHTGRILQFEL 383
           LLH+G I +F+L
Sbjct: 89  LLHSGPINKFKL 100


>ref|XP_003589308.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355478356|gb|AES59559.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 428

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 37/72 (51%), Positives = 47/72 (65%), Gaps = 5/72 (6%)
 Frame = +3

Query: 183 KILEHLPIRDAVRTSVLSTKWRYVWASLPKLVFDEHKFMHDR-----INFRFSESVDRVL 347
           +IL  LPI++AVRTS+LSTKWRY WA+LP LVFD             I  + S  +D VL
Sbjct: 29  QILSILPIKEAVRTSILSTKWRYKWATLPNLVFDSQCISDTSEDLLVIKSKLSRIIDHVL 88

Query: 348 LLHTGRILQFEL 383
           LLH+G I +F+L
Sbjct: 89  LLHSGPIKKFKL 100


>ref|XP_003589307.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355478355|gb|AES59558.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 660

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 37/72 (51%), Positives = 47/72 (65%), Gaps = 5/72 (6%)
 Frame = +3

Query: 183 KILEHLPIRDAVRTSVLSTKWRYVWASLPKLVFDEHKFMHDR-----INFRFSESVDRVL 347
           +IL  LPI++AVRTS+LSTKWRY WA+LP LVFD             I  + S  +D VL
Sbjct: 261 QILSILPIKEAVRTSILSTKWRYKWATLPNLVFDSQCISDTSEDLLVIKSKLSRIIDHVL 320

Query: 348 LLHTGRILQFEL 383
           LLH+G I +F+L
Sbjct: 321 LLHSGPIKKFKL 332


>ref|XP_003588676.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355477724|gb|AES58927.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 428

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 36/75 (48%), Positives = 50/75 (66%), Gaps = 8/75 (10%)
 Frame = +3

Query: 183 KILEHLPIRDAVRTSVLSTKWRYVWASLPKLVFDEH--------KFMHDRINFRFSESVD 338
           KIL HLPIR+AVRTSVLS KWRY WA++P LVFD+           +   +  +  E +D
Sbjct: 19  KILSHLPIREAVRTSVLSNKWRYKWATIPNLVFDKQCVSATSKCSELFLDMEGKLMEIID 78

Query: 339 RVLLLHTGRILQFEL 383
           +VLLL++G I +F++
Sbjct: 79  QVLLLYSGPINKFQI 93


>ref|XP_003518816.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Glycine
           max]
          Length = 421

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 36/70 (51%), Positives = 48/70 (68%), Gaps = 4/70 (5%)
 Frame = +3

Query: 186 ILEHLPIRDAVRTSVLSTKWRYVWASLPKLVFDEH--KFMHDR--INFRFSESVDRVLLL 353
           IL  LPIRDAVRTS+LS+KWRY WAS+ +LVFD+    F +DR  +     + + RVL L
Sbjct: 21  ILVQLPIRDAVRTSILSSKWRYKWASITQLVFDDKCVPFSNDREAVEKSVVKFITRVLFL 80

Query: 354 HTGRILQFEL 383
           H G I +F++
Sbjct: 81  HQGPIHKFQI 90


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