BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00036693
         (236 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor rpoD ...    57   2e-06
emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera]    57   2e-06

>ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]
           gi|296081598|emb|CBI20603.3| unnamed protein product
           [Vitis vinifera]
          Length = 561

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 34/76 (44%), Positives = 45/76 (59%), Gaps = 9/76 (11%)
 Frame = -3

Query: 234 ALKLFHACLSSTVSTSTAIE-----NEFLRECLGKKPENE----IVVHSGKKEQRKLRRD 82
           ALKLF  CLS T+ TST+ +      E +REC      ++    +VV SGKKE+RK +R+
Sbjct: 162 ALKLFQICLSRTLKTSTSFDLFSAPTEHIRECQTNGTVDDHLDKVVVRSGKKEERKSKRE 221

Query: 81  RASEKARKVKTAPLSS 34
           RA EKA  +   PL S
Sbjct: 222 RALEKADNIYAFPLPS 237


>emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera]
          Length = 611

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 34/76 (44%), Positives = 45/76 (59%), Gaps = 9/76 (11%)
 Frame = -3

Query: 234 ALKLFHACLSSTVSTSTAIE-----NEFLRECLGKKPENE----IVVHSGKKEQRKLRRD 82
           ALKLF  CLS T+ TST+ +      E +REC      ++    +VV SGKKE+RK +R+
Sbjct: 212 ALKLFQICLSRTLKTSTSFDLFSAPTEHIRECQTNGTVDDHLDKVVVRSGKKEERKSKRE 271

Query: 81  RASEKARKVKTAPLSS 34
           RA EKA  +   PL S
Sbjct: 272 RALEKADNIYAFPLPS 287