BLASTX nr result

ID: Dioscorea21_contig00036679 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00036679
         (412 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279752.2| PREDICTED: WD repeat-containing protein 18-l...   161   6e-38
emb|CBI15639.3| unnamed protein product [Vitis vinifera]              161   6e-38
ref|XP_002511209.1| WD-repeat protein, putative [Ricinus communi...   150   1e-34
ref|XP_002322240.1| predicted protein [Populus trichocarpa] gi|2...   147   7e-34
emb|CAN81788.1| hypothetical protein VITISV_026009 [Vitis vinifera]   146   1e-33

>ref|XP_002279752.2| PREDICTED: WD repeat-containing protein 18-like [Vitis vinifera]
          Length = 476

 Score =  161 bits (407), Expect = 6e-38
 Identities = 83/137 (60%), Positives = 98/137 (71%), Gaps = 1/137 (0%)
 Frame = +3

Query: 3   GGALSGNTYIWEVTSGRLLKYWHAHHGSLICLAFSPDDSLLISGSEDGVICVWHMISLLD 182
           GGA SGN YIWEV  GRLLK W AHH SL  + FS DDSLLISGS+DG+I VW MISLLD
Sbjct: 104 GGAPSGNAYIWEVADGRLLKTWRAHHKSLTSMVFSDDDSLLISGSDDGMIRVWSMISLLD 163

Query: 183 IADLPACGNLAPL-HILSEHVSSITSLLPMSSHSEPMLISSSLDGMCKVSNIVSGKTVCN 359
           IAD   CG    L H L EH SSIT LL +S  S P+L+SSSLDG CKV +++ G+ +  
Sbjct: 164 IAD---CGRFPSLFHSLLEHTSSITGLLSISGSSSPVLVSSSLDGTCKVWDLIRGRLLRT 220

Query: 360 HIFPVSITSIAVDPSEQ 410
            +FP +IT+I +DP EQ
Sbjct: 221 RVFPTAITAIVLDPGEQ 237


>emb|CBI15639.3| unnamed protein product [Vitis vinifera]
          Length = 281

 Score =  161 bits (407), Expect = 6e-38
 Identities = 83/137 (60%), Positives = 98/137 (71%), Gaps = 1/137 (0%)
 Frame = +3

Query: 3   GGALSGNTYIWEVTSGRLLKYWHAHHGSLICLAFSPDDSLLISGSEDGVICVWHMISLLD 182
           GGA SGN YIWEV  GRLLK W AHH SL  + FS DDSLLISGS+DG+I VW MISLLD
Sbjct: 104 GGAPSGNAYIWEVADGRLLKTWRAHHKSLTSMVFSDDDSLLISGSDDGMIRVWSMISLLD 163

Query: 183 IADLPACGNLAPL-HILSEHVSSITSLLPMSSHSEPMLISSSLDGMCKVSNIVSGKTVCN 359
           IAD   CG    L H L EH SSIT LL +S  S P+L+SSSLDG CKV +++ G+ +  
Sbjct: 164 IAD---CGRFPSLFHSLLEHTSSITGLLSISGSSSPVLVSSSLDGTCKVWDLIRGRLLRT 220

Query: 360 HIFPVSITSIAVDPSEQ 410
            +FP +IT+I +DP EQ
Sbjct: 221 RVFPTAITAIVLDPGEQ 237


>ref|XP_002511209.1| WD-repeat protein, putative [Ricinus communis]
           gi|223550324|gb|EEF51811.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 471

 Score =  150 bits (378), Expect = 1e-34
 Identities = 76/136 (55%), Positives = 98/136 (72%)
 Frame = +3

Query: 3   GGALSGNTYIWEVTSGRLLKYWHAHHGSLICLAFSPDDSLLISGSEDGVICVWHMISLLD 182
           GG+ SGN YIWEVTSGRLLK W AHH SL C+ FS DDSLLISGS+DG+IC+W MISLLD
Sbjct: 102 GGSPSGNAYIWEVTSGRLLKTWGAHHSSLKCMVFSNDDSLLISGSDDGIICMWSMISLLD 161

Query: 183 IADLPACGNLAPLHILSEHVSSITSLLPMSSHSEPMLISSSLDGMCKVSNIVSGKTVCNH 362
           + +  +  +L  LH  SEH SSI+ LL  S +S    ISSSLD  CK  ++VSG+ + + 
Sbjct: 162 MENSGSSSSL--LHYSSEHKSSISGLLTTSGNSNSTFISSSLDATCKAWDLVSGEPIQSQ 219

Query: 363 IFPVSITSIAVDPSEQ 410
            +P++IT+I + P +Q
Sbjct: 220 EYPLAITAIILHPVDQ 235


>ref|XP_002322240.1| predicted protein [Populus trichocarpa] gi|222869236|gb|EEF06367.1|
           predicted protein [Populus trichocarpa]
          Length = 401

 Score =  147 bits (372), Expect = 7e-34
 Identities = 75/136 (55%), Positives = 91/136 (66%)
 Frame = +3

Query: 3   GGALSGNTYIWEVTSGRLLKYWHAHHGSLICLAFSPDDSLLISGSEDGVICVWHMISLLD 182
           GG+ SGN Y+WEV  GRLLK W AH  SL CL FS DDSLLISGSEDGV+CVW M+SLLD
Sbjct: 105 GGSPSGNVYLWEVAGGRLLKTWRAHSRSLKCLIFSNDDSLLISGSEDGVVCVWSMVSLLD 164

Query: 183 IADLPACGNLAPLHILSEHVSSITSLLPMSSHSEPMLISSSLDGMCKVSNIVSGKTVCNH 362
             D  +  +L  LH  SEH SS+T LL  S  +    ISSSLD  CK  ++ SG+ +   
Sbjct: 165 TEDFGSSCSL--LHYSSEHTSSVTGLLTTSGIANSTFISSSLDATCKAWDVFSGRLIQTQ 222

Query: 363 IFPVSITSIAVDPSEQ 410
            +P+ IT+I  DP+EQ
Sbjct: 223 DYPLGITAIVTDPAEQ 238


>emb|CAN81788.1| hypothetical protein VITISV_026009 [Vitis vinifera]
          Length = 503

 Score =  146 bits (369), Expect = 1e-33
 Identities = 83/164 (50%), Positives = 98/164 (59%), Gaps = 28/164 (17%)
 Frame = +3

Query: 3   GGALSGNTYIWEVTSGRLLKYWHAHHGSLICLAFSPDDSLLISGSEDGVICVWHMI---- 170
           GGA SGN YIWEV  GRLLK W AHH SL  + FS DDSLLISGS+DG+I VW MI    
Sbjct: 104 GGAPSGNAYIWEVADGRLLKTWRAHHKSLTSMVFSDDDSLLISGSDDGMIRVWSMISKNK 163

Query: 171 -----------------------SLLDIADLPACGNLAPL-HILSEHVSSITSLLPMSSH 278
                                  SLLDIAD   CG    L H L EH SSIT LL +S  
Sbjct: 164 RFCLFLEKFEMIHFCELLINLDGSLLDIAD---CGRFPSLFHSLLEHTSSITGLLSISGS 220

Query: 279 SEPMLISSSLDGMCKVSNIVSGKTVCNHIFPVSITSIAVDPSEQ 410
           S P+L+SSSLDG CKV +++ G+ +   +FP +IT+I +DP EQ
Sbjct: 221 SSPVLVSSSLDGTCKVWDLIRGRLLRTRVFPTAITAIVLDPGEQ 264


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