BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00036660
         (334 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004137118.1| PREDICTED: pentatricopeptide repeat-containi...    68   7e-10
ref|XP_002331286.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09
ref|XP_003621610.1| Pentatricopeptide repeat-containing protein ...    65   6e-09
ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containi...    64   2e-08
emb|CBI16904.3| unnamed protein product [Vitis vinifera]               64   2e-08

>ref|XP_004137118.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Cucumis sativus]
           gi|449528041|ref|XP_004171015.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g02330-like [Cucumis sativus]
          Length = 868

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 30/43 (69%), Positives = 35/43 (81%)
 Frame = -1

Query: 133 RKTFSHIFQECSRSQRSNAGKQAHAQMITSGFSPTIFVSNCLI 5
           RKTFSHIFQECS  +    GK+AHA MI SGF+PT+FV+NCLI
Sbjct: 24  RKTFSHIFQECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLI 66


>ref|XP_002331286.1| predicted protein [Populus trichocarpa] gi|222873711|gb|EEF10842.1|
           predicted protein [Populus trichocarpa]
          Length = 897

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 33/61 (54%), Positives = 39/61 (63%), Gaps = 2/61 (3%)
 Frame = -1

Query: 181 PNLRHGRLFSSTSLPPRK--TFSHIFQECSRSQRSNAGKQAHAQMITSGFSPTIFVSNCL 8
           P      L  + + PP K  TFSHI+QECS+    N GKQAHA+MI  GF PT FVSNCL
Sbjct: 31  PTNNFSTLAQNQTQPPAKIRTFSHIYQECSKQNSLNPGKQAHARMIFCGFEPTTFVSNCL 90

Query: 7   I 5
           +
Sbjct: 91  M 91


>ref|XP_003621610.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355496625|gb|AES77828.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 881

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 31/52 (59%), Positives = 38/52 (73%), Gaps = 2/52 (3%)
 Frame = -1

Query: 154 SSTSLPPRK--TFSHIFQECSRSQRSNAGKQAHAQMITSGFSPTIFVSNCLI 5
           SS  + P K  TFSHIFQ+CS  +  N GKQAHAQ+  +GF PT+FVSNCL+
Sbjct: 29  SSNQMNPTKKLTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLL 80


>ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Vitis vinifera]
          Length = 877

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 32/53 (60%), Positives = 38/53 (71%), Gaps = 2/53 (3%)
 Frame = -1

Query: 157 FSSTSLPP--RKTFSHIFQECSRSQRSNAGKQAHAQMITSGFSPTIFVSNCLI 5
           FSS    P  +KTFSHIFQECS  +    GKQAHA+MI + F PT+FV+NCLI
Sbjct: 32  FSSYQATPTKKKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLI 84


>emb|CBI16904.3| unnamed protein product [Vitis vinifera]
          Length = 843

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 32/53 (60%), Positives = 38/53 (71%), Gaps = 2/53 (3%)
 Frame = -1

Query: 157 FSSTSLPP--RKTFSHIFQECSRSQRSNAGKQAHAQMITSGFSPTIFVSNCLI 5
           FSS    P  +KTFSHIFQECS  +    GKQAHA+MI + F PT+FV+NCLI
Sbjct: 32  FSSYQATPTKKKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLI 84