BLASTX nr result

ID: Dioscorea21_contig00036625 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00036625
         (258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003522715.1| PREDICTED: E3 ubiquitin-protein ligase HERC2...   131   5e-29
ref|XP_004162977.1| PREDICTED: E3 ubiquitin-protein ligase HERC2...   131   7e-29
ref|XP_004148391.1| PREDICTED: E3 ubiquitin-protein ligase HERC2...   131   7e-29
ref|XP_002324218.1| predicted protein [Populus trichocarpa] gi|2...   130   1e-28
dbj|BAJ94465.1| predicted protein [Hordeum vulgare subsp. vulgar...   128   6e-28

>ref|XP_003522715.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Glycine max]
          Length = 559

 Score =  131 bits (330), Expect = 5e-29
 Identities = 58/82 (70%), Positives = 67/82 (81%)
 Frame = +2

Query: 2   CWTFGLGDNGQLGHGTTMNECFPRAIKGLPEDMRLCSVVCGLFHTSVATAYGNVWSWGME 181
           CWTFGLGDNGQLGHGTT +  FP  +K LP+++ L  V CGLFHTSV ++ G+VWSWGME
Sbjct: 299 CWTFGLGDNGQLGHGTTQSTLFPTPVKELPQNVSLICVDCGLFHTSVVSSDGDVWSWGME 358

Query: 182 KGLGLCPDASLRGDDAGDALSP 247
           KGLGLCPDAS  G D+GDALSP
Sbjct: 359 KGLGLCPDASRAGTDSGDALSP 380


>ref|XP_004162977.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cucumis sativus]
          Length = 581

 Score =  131 bits (329), Expect = 7e-29
 Identities = 55/83 (66%), Positives = 68/83 (81%)
 Frame = +2

Query: 2   CWTFGLGDNGQLGHGTTMNECFPRAIKGLPEDMRLCSVVCGLFHTSVATAYGNVWSWGME 181
           CWTFGLG+NGQLGHGTT NE  P+ +K LP+ + L SV CGLFHTSV ++ G++WSWGME
Sbjct: 287 CWTFGLGENGQLGHGTTQNEFLPQPVKELPQSVSLISVACGLFHTSVVSSGGDLWSWGME 346

Query: 182 KGLGLCPDASLRGDDAGDALSPI 250
           +GLGLCPDAS  G + GDA+SP+
Sbjct: 347 RGLGLCPDASFTGTNTGDAISPL 369


>ref|XP_004148391.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cucumis sativus]
          Length = 571

 Score =  131 bits (329), Expect = 7e-29
 Identities = 55/83 (66%), Positives = 68/83 (81%)
 Frame = +2

Query: 2   CWTFGLGDNGQLGHGTTMNECFPRAIKGLPEDMRLCSVVCGLFHTSVATAYGNVWSWGME 181
           CWTFGLG+NGQLGHGTT NE  P+ +K LP+ + L SV CGLFHTSV ++ G++WSWGME
Sbjct: 287 CWTFGLGENGQLGHGTTQNEFLPQPVKELPQSVSLISVACGLFHTSVVSSGGDLWSWGME 346

Query: 182 KGLGLCPDASLRGDDAGDALSPI 250
           +GLGLCPDAS  G + GDA+SP+
Sbjct: 347 RGLGLCPDASFTGTNTGDAISPL 369


>ref|XP_002324218.1| predicted protein [Populus trichocarpa] gi|222865652|gb|EEF02783.1|
           predicted protein [Populus trichocarpa]
          Length = 561

 Score =  130 bits (327), Expect = 1e-28
 Identities = 59/85 (69%), Positives = 65/85 (76%)
 Frame = +2

Query: 2   CWTFGLGDNGQLGHGTTMNECFPRAIKGLPEDMRLCSVVCGLFHTSVATAYGNVWSWGME 181
           CWTFGLGDNGQLGHGTT +   P  +K LP    L SV CGLFHTSV ++ G+VWSWGME
Sbjct: 281 CWTFGLGDNGQLGHGTTQSVLKPEPVKELPGQAHLISVDCGLFHTSVVSSVGDVWSWGME 340

Query: 182 KGLGLCPDASLRGDDAGDALSPIRM 256
           KGLGLCPDAS  G DAGDA SP+ M
Sbjct: 341 KGLGLCPDASFTGTDAGDAASPLLM 365


>dbj|BAJ94465.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326532960|dbj|BAJ89325.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 566

 Score =  128 bits (321), Expect = 6e-28
 Identities = 56/85 (65%), Positives = 65/85 (76%)
 Frame = +2

Query: 2   CWTFGLGDNGQLGHGTTMNECFPRAIKGLPEDMRLCSVVCGLFHTSVATAYGNVWSWGME 181
           CWTFG+GDNGQLGHGTT   C P+ + GLP    L S+ CGLFHT+V ++ G VW WGME
Sbjct: 278 CWTFGIGDNGQLGHGTTATTCSPQPVDGLPTGSFLISLDCGLFHTAVVSSDGEVWCWGME 337

Query: 182 KGLGLCPDASLRGDDAGDALSPIRM 256
           +GLGLCPDAS  G DAGDAL PIR+
Sbjct: 338 RGLGLCPDASFSGMDAGDALHPIRV 362


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