BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00036591
         (347 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAO17005.1| Putative gag-pol polyprotein [Oryza sativa Japoni...   108   1e-24
gb|AAT58770.1| putative polyprotein [Oryza sativa Japonica Group]     102   9e-24
emb|CCI55315.1| PH01B001I13.11 [Phyllostachys edulis]                 106   2e-23
gb|ABB47665.1| retrotransposon protein, putative, unclassified, ...    95   8e-21
ref|NP_001173372.1| Os03g0285066 [Oryza sativa Japonica Group] g...    99   4e-19

>gb|AAO17005.1| Putative gag-pol polyprotein [Oryza sativa Japonica Group]
          Length = 2071

 Score =  108 bits (271), Expect(2) = 1e-24
 Identities = 53/80 (66%), Positives = 63/80 (78%)
 Frame = -1

Query: 293  PTPLHCDNTGAIQITLNPVKHSLSKHIGVDAFFLRDQHSKGILAPQFVPSERQLADLFTK 114
            PTPL  D+T AI +  +PVKH LSKH+GVDAF+ R Q   G++AP++VPSE QLADLFTK
Sbjct: 1992 PTPLLSDSTDAISMARDPVKHELSKHVGVDAFYTRAQVQDGVVAPRYVPSEIQLADLFTK 2051

Query: 113  SQTRAQHDFLLSKLSVSDPP 54
            +QT AQH F LSKLSV DPP
Sbjct: 2052 AQTGAQHRFYLSKLSVLDPP 2071



 Score = 28.9 bits (63), Expect(2) = 1e-24
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = -3

Query: 345  EIVWLRWLLHDLGV 304
            E+ WLRWLL D GV
Sbjct: 1974 EVTWLRWLLEDFGV 1987


>gb|AAT58770.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1419

 Score =  102 bits (255), Expect(2) = 9e-24
 Identities = 51/85 (60%), Positives = 57/85 (67%)
 Frame = -1

Query: 308  VLSHTPTPLHCDNTGAIQITLNPVKHSLSKHIGVDAFFLRDQHSKGILAPQFVPSERQLA 129
            V+   PT L CDNT AIQI  NPVKH LSKHIG DA F R  +    +   ++PSE Q+A
Sbjct: 1333 VVLSQPTSLFCDNTSAIQIASNPVKHELSKHIGTDASFTRFHYQHRTICLHYLPSELQVA 1392

Query: 128  DLFTKSQTRAQHDFLLSKLSVSDPP 54
            D FTK QTR QHDFLLSKL   DPP
Sbjct: 1393 DFFTKPQTRDQHDFLLSKLKAVDPP 1417



 Score = 32.3 bits (72), Expect(2) = 9e-24
 Identities = 12/15 (80%), Positives = 14/15 (93%)
 Frame = -3

Query: 345  EIVWLRWLLHDLGVV 301
            E++WLRWLL DLGVV
Sbjct: 1320 EVIWLRWLLADLGVV 1334


>emb|CCI55315.1| PH01B001I13.11 [Phyllostachys edulis]
          Length = 1385

 Score =  106 bits (265), Expect(2) = 2e-23
 Identities = 53/81 (65%), Positives = 62/81 (76%)
 Frame = -1

Query: 296  TPTPLHCDNTGAIQITLNPVKHSLSKHIGVDAFFLRDQHSKGILAPQFVPSERQLADLFT 117
            TPTPL  D+TGAI I  +PVKH L+KHIGVDA F+R      ++A Q+VPSE Q+AD FT
Sbjct: 1305 TPTPLLSDSTGAISIARDPVKHELTKHIGVDASFMRSCVHDQVIALQYVPSELQIADFFT 1364

Query: 116  KSQTRAQHDFLLSKLSVSDPP 54
            K+QTRAQH F LSKLSV DPP
Sbjct: 1365 KAQTRAQHGFYLSKLSVVDPP 1385



 Score = 26.9 bits (58), Expect(2) = 2e-23
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = -3

Query: 345  EIVWLRWLLHDLGV 304
            EI WLRWLL D  V
Sbjct: 1288 EITWLRWLLEDFSV 1301


>gb|ABB47665.1| retrotransposon protein, putative, unclassified, expressed [Oryza
            sativa Japonica Group] gi|78708691|gb|ABB47666.1|
            retrotransposon protein, putative, unclassified,
            expressed [Oryza sativa Japonica Group]
          Length = 1682

 Score = 95.1 bits (235), Expect(2) = 8e-21
 Identities = 48/80 (60%), Positives = 57/80 (71%)
 Frame = -1

Query: 293  PTPLHCDNTGAIQITLNPVKHSLSKHIGVDAFFLRDQHSKGILAPQFVPSERQLADLFTK 114
            PTPL CDNTGAIQI  +P+KH L+KHIGVDA F R    +  +A  +VPSE Q+AD FTK
Sbjct: 1185 PTPLLCDNTGAIQIANDPIKHELTKHIGVDASFTRSHCQQSTIALHYVPSELQVADFFTK 1244

Query: 113  SQTRAQHDFLLSKLSVSDPP 54
            +QTR  H   L KL+V DPP
Sbjct: 1245 AQTREHHRLHLLKLNV-DPP 1263



 Score = 30.0 bits (66), Expect(2) = 8e-21
 Identities = 12/14 (85%), Positives = 12/14 (85%)
 Frame = -3

Query: 345  EIVWLRWLLHDLGV 304
            EIVWLRWLL D GV
Sbjct: 1167 EIVWLRWLLADFGV 1180


>ref|NP_001173372.1| Os03g0285066 [Oryza sativa Japonica Group]
           gi|255674418|dbj|BAH92100.1| Os03g0285066 [Oryza sativa
           Japonica Group]
          Length = 612

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 48/72 (66%), Positives = 57/72 (79%)
 Frame = -1

Query: 269 TGAIQITLNPVKHSLSKHIGVDAFFLRDQHSKGILAPQFVPSERQLADLFTKSQTRAQHD 90
           T AI +  +PVKH LSKH+GVDAF+ R Q   G++AP++VPSE QLADLFTK+QT AQH 
Sbjct: 541 TDAISMARDPVKHELSKHVGVDAFYTRAQVQDGVVAPRYVPSEIQLADLFTKAQTGAQHR 600

Query: 89  FLLSKLSVSDPP 54
           F LSKLSV DPP
Sbjct: 601 FYLSKLSVLDPP 612