BLASTX nr result

ID: Dioscorea21_contig00036544 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00036544
         (361 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAL58900.1|AF462806_1 AT3g06940/F17A9_9 [Arabidopsis thaliana...    39   4e-06
gb|AAF26998.1|AC016827_9 putative mudrA protein [Arabidopsis tha...    39   4e-06

>gb|AAL58900.1|AF462806_1 AT3g06940/F17A9_9 [Arabidopsis thaliana] gi|17380908|gb|AAL36266.1|
           putative mudrA protein [Arabidopsis thaliana]
           gi|20855902|gb|AAM26637.1| AT3g06940/F17A9_9
           [Arabidopsis thaliana] gi|28393919|gb|AAO42367.1|
           putative mudrA protein [Arabidopsis thaliana]
          Length = 749

 Score = 38.9 bits (89), Expect(2) = 4e-06
 Identities = 18/51 (35%), Positives = 33/51 (64%)
 Frame = +1

Query: 1   YACTYLEYDEAVGSLLATSGQSHHWMFQKSDMPHWCNYLFKGQRWGEMYSN 153
           YA T + Y  A+ ++ + S  +++W+ + S+  HW N LF+G+R+ +M SN
Sbjct: 494 YATTPVGYYLALENIKSISPDAYNWVIE-SEPHHWANALFQGERYNKMNSN 543



 Score = 36.6 bits (83), Expect(2) = 4e-06
 Identities = 16/54 (29%), Positives = 30/54 (55%)
 Frame = +3

Query: 159 ESFNAWIQEA*HFPVCKMVDAIRFKMMTMMYNQCQCCLKWESHLWLVIHKKIER 320
           + F +W+ EA  FP+ +M+D  R KMM  +Y +     +W + L     +K+++
Sbjct: 546 KDFYSWVSEAHEFPITQMIDEFRAKMMQSIYTRQVKSREWVTTLTPSNEEKLQK 599


>gb|AAF26998.1|AC016827_9 putative mudrA protein [Arabidopsis thaliana]
          Length = 609

 Score = 38.9 bits (89), Expect(2) = 4e-06
 Identities = 18/51 (35%), Positives = 33/51 (64%)
 Frame = +1

Query: 1   YACTYLEYDEAVGSLLATSGQSHHWMFQKSDMPHWCNYLFKGQRWGEMYSN 153
           YA T + Y  A+ ++ + S  +++W+ + S+  HW N LF+G+R+ +M SN
Sbjct: 354 YATTPVGYYLALENIKSISPDAYNWVIE-SEPHHWANALFQGERYNKMNSN 403



 Score = 36.6 bits (83), Expect(2) = 4e-06
 Identities = 16/54 (29%), Positives = 30/54 (55%)
 Frame = +3

Query: 159 ESFNAWIQEA*HFPVCKMVDAIRFKMMTMMYNQCQCCLKWESHLWLVIHKKIER 320
           + F +W+ EA  FP+ +M+D  R KMM  +Y +     +W + L     +K+++
Sbjct: 406 KDFYSWVSEAHEFPITQMIDEFRAKMMQSIYTRQVKSREWVTTLTPSNEEKLQK 459


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