BLASTX nr result

ID: Dioscorea21_contig00036543 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00036543
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001062234.1| Os08g0515700 [Oryza sativa Japonica Group] g...    62   6e-08
gb|EAZ43330.1| hypothetical protein OsJ_27926 [Oryza sativa Japo...    62   6e-08
dbj|BAJ87467.1| predicted protein [Hordeum vulgare subsp. vulgare]     60   2e-07
gb|EAZ07620.1| hypothetical protein OsI_29872 [Oryza sativa Indi...    59   4e-07
gb|ADB85370.1| putative ternary complex factor MIP1 [Phyllostach...    58   7e-07

>ref|NP_001062234.1| Os08g0515700 [Oryza sativa Japonica Group]
           gi|42408754|dbj|BAD09990.1| ternary complex factor-like
           [Oryza sativa Japonica Group]
           gi|113624203|dbj|BAF24148.1| Os08g0515700 [Oryza sativa
           Japonica Group]
          Length = 538

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 25/48 (52%), Positives = 38/48 (79%)
 Frame = +2

Query: 86  TKSISSHRSLADHMGASLMDHVPNFPCRISEEIVRCIAAIYCKLANHP 229
           ++S S H SLA+ + AS+ ++VP   C++SE+IVRCI+A+YCKLA+ P
Sbjct: 184 SRSSSGHSSLANFLSASIAEYVPKISCKLSEDIVRCISAVYCKLASQP 231


>gb|EAZ43330.1| hypothetical protein OsJ_27926 [Oryza sativa Japonica Group]
          Length = 487

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 25/48 (52%), Positives = 38/48 (79%)
 Frame = +2

Query: 86  TKSISSHRSLADHMGASLMDHVPNFPCRISEEIVRCIAAIYCKLANHP 229
           ++S S H SLA+ + AS+ ++VP   C++SE+IVRCI+A+YCKLA+ P
Sbjct: 133 SRSSSGHSSLANFLSASIAEYVPKISCKLSEDIVRCISAVYCKLASQP 180


>dbj|BAJ87467.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 535

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 24/47 (51%), Positives = 37/47 (78%)
 Frame = +2

Query: 89  KSISSHRSLADHMGASLMDHVPNFPCRISEEIVRCIAAIYCKLANHP 229
           +S S H SLA+ + AS+ ++VP   C++SE+I+RCI+A+YCKLA+ P
Sbjct: 183 RSTSGHSSLANFLSASIAEYVPRIACKLSEDILRCISAVYCKLASSP 229


>gb|EAZ07620.1| hypothetical protein OsI_29872 [Oryza sativa Indica Group]
          Length = 487

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 24/46 (52%), Positives = 37/46 (80%)
 Frame = +2

Query: 86  TKSISSHRSLADHMGASLMDHVPNFPCRISEEIVRCIAAIYCKLAN 223
           ++S S H SLA+ + AS+ ++VP   C++SE+IVRCI+A+YCKLA+
Sbjct: 133 SRSSSGHSSLANFLSASIAEYVPKISCKLSEDIVRCISAVYCKLAS 178


>gb|ADB85370.1| putative ternary complex factor MIP1 [Phyllostachys edulis]
          Length = 461

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 23/48 (47%), Positives = 37/48 (77%)
 Frame = +2

Query: 86  TKSISSHRSLADHMGASLMDHVPNFPCRISEEIVRCIAAIYCKLANHP 229
           ++S S   SLA+ + AS+ ++VP   C++SE+I+RCI+A+YCKLA+ P
Sbjct: 151 SRSSSGQSSLANFLSASIAEYVPKISCKLSEDIIRCISAVYCKLASRP 198


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