BLASTX nr result

ID: Dioscorea21_contig00036521 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00036521
         (468 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37240.3| unnamed protein product [Vitis vinifera]              206   2e-51
ref|XP_002265367.1| PREDICTED: CLIP-associating protein-like [Vi...   206   2e-51
dbj|BAE98846.1| hypothetical protein [Arabidopsis thaliana]           197   7e-49
ref|NP_849997.2| CLIP-associated protein [Arabidopsis thaliana] ...   197   7e-49
gb|AAD21767.1| hypothetical protein [Arabidopsis thaliana]            197   7e-49

>emb|CBI37240.3| unnamed protein product [Vitis vinifera]
          Length = 200

 Score =  206 bits (523), Expect = 2e-51
 Identities = 102/138 (73%), Positives = 112/138 (81%)
 Frame = +1

Query: 55  MEEVLEMARVKDTKERMAAVERLHQYLESSQKPLSSAEVTALVDCCMDLLKDHNFRXXXX 234
           MEE LE+AR KDTKERMA VERLH  LESS+K LSSAEVT+LVDCC+DLLKD+NFR    
Sbjct: 1   MEEALELARAKDTKERMAGVERLHHLLESSRKALSSAEVTSLVDCCLDLLKDNNFRVSQG 60

Query: 235 XXXXXXXXXXXXREHLKIHFNGLVPAVVERLGDGKQPVRDAARQLFITLMEISSPTIIVE 414
                        +H K+HFN LVPAVVERLGDGKQPVRDAAR+L +TLME+SSPTIIVE
Sbjct: 61  SLQALASAAVLSGDHFKLHFNALVPAVVERLGDGKQPVRDAARRLLLTLMEVSSPTIIVE 120

Query: 415 RAGSYAWTHKSWRVREEF 468
           RAGSYAWTHKSWRVREEF
Sbjct: 121 RAGSYAWTHKSWRVREEF 138


>ref|XP_002265367.1| PREDICTED: CLIP-associating protein-like [Vitis vinifera]
          Length = 1440

 Score =  206 bits (523), Expect = 2e-51
 Identities = 102/138 (73%), Positives = 112/138 (81%)
 Frame = +1

Query: 55  MEEVLEMARVKDTKERMAAVERLHQYLESSQKPLSSAEVTALVDCCMDLLKDHNFRXXXX 234
           MEE LE+AR KDTKERMA VERLH  LESS+K LSSAEVT+LVDCC+DLLKD+NFR    
Sbjct: 1   MEEALELARAKDTKERMAGVERLHHLLESSRKALSSAEVTSLVDCCLDLLKDNNFRVSQG 60

Query: 235 XXXXXXXXXXXXREHLKIHFNGLVPAVVERLGDGKQPVRDAARQLFITLMEISSPTIIVE 414
                        +H K+HFN LVPAVVERLGDGKQPVRDAAR+L +TLME+SSPTIIVE
Sbjct: 61  SLQALASAAVLSGDHFKLHFNALVPAVVERLGDGKQPVRDAARRLLLTLMEVSSPTIIVE 120

Query: 415 RAGSYAWTHKSWRVREEF 468
           RAGSYAWTHKSWRVREEF
Sbjct: 121 RAGSYAWTHKSWRVREEF 138


>dbj|BAE98846.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1031

 Score =  197 bits (501), Expect = 7e-49
 Identities = 101/138 (73%), Positives = 108/138 (78%)
 Frame = +1

Query: 55  MEEVLEMARVKDTKERMAAVERLHQYLESSQKPLSSAEVTALVDCCMDLLKDHNFRXXXX 234
           MEE LEMAR KDTKERMAAVERLHQ LE+S+K LS AEVT+LVD C+DLLKD NFR    
Sbjct: 1   MEEALEMARAKDTKERMAAVERLHQLLEASRKSLSPAEVTSLVDSCLDLLKDSNFRVSQG 60

Query: 235 XXXXXXXXXXXXREHLKIHFNGLVPAVVERLGDGKQPVRDAARQLFITLMEISSPTIIVE 414
                        EHLK+H N LVPAVVERLGD KQPVRDAAR+L  TLME+SSPTIIVE
Sbjct: 61  ALQALASAAVLAGEHLKLHLNALVPAVVERLGDSKQPVRDAARRLLTTLMEVSSPTIIVE 120

Query: 415 RAGSYAWTHKSWRVREEF 468
           RAGSYAW HKSWRVREEF
Sbjct: 121 RAGSYAWMHKSWRVREEF 138


>ref|NP_849997.2| CLIP-associated protein [Arabidopsis thaliana]
           gi|20259452|gb|AAM13846.1| unknown protein [Arabidopsis
           thaliana] gi|330251886|gb|AEC06980.1| CLIP-associated
           protein [Arabidopsis thaliana]
          Length = 1439

 Score =  197 bits (501), Expect = 7e-49
 Identities = 101/138 (73%), Positives = 108/138 (78%)
 Frame = +1

Query: 55  MEEVLEMARVKDTKERMAAVERLHQYLESSQKPLSSAEVTALVDCCMDLLKDHNFRXXXX 234
           MEE LEMAR KDTKERMAAVERLHQ LE+S+K LS AEVT+LVD C+DLLKD NFR    
Sbjct: 1   MEEALEMARAKDTKERMAAVERLHQLLEASRKSLSPAEVTSLVDSCLDLLKDSNFRVSQG 60

Query: 235 XXXXXXXXXXXXREHLKIHFNGLVPAVVERLGDGKQPVRDAARQLFITLMEISSPTIIVE 414
                        EHLK+H N LVPAVVERLGD KQPVRDAAR+L  TLME+SSPTIIVE
Sbjct: 61  ALQALASAAVLAGEHLKLHLNALVPAVVERLGDSKQPVRDAARRLLTTLMEVSSPTIIVE 120

Query: 415 RAGSYAWTHKSWRVREEF 468
           RAGSYAW HKSWRVREEF
Sbjct: 121 RAGSYAWMHKSWRVREEF 138


>gb|AAD21767.1| hypothetical protein [Arabidopsis thaliana]
          Length = 199

 Score =  197 bits (501), Expect = 7e-49
 Identities = 101/138 (73%), Positives = 108/138 (78%)
 Frame = +1

Query: 55  MEEVLEMARVKDTKERMAAVERLHQYLESSQKPLSSAEVTALVDCCMDLLKDHNFRXXXX 234
           MEE LEMAR KDTKERMAAVERLHQ LE+S+K LS AEVT+LVD C+DLLKD NFR    
Sbjct: 1   MEEALEMARAKDTKERMAAVERLHQLLEASRKSLSPAEVTSLVDSCLDLLKDSNFRVSQG 60

Query: 235 XXXXXXXXXXXXREHLKIHFNGLVPAVVERLGDGKQPVRDAARQLFITLMEISSPTIIVE 414
                        EHLK+H N LVPAVVERLGD KQPVRDAAR+L  TLME+SSPTIIVE
Sbjct: 61  ALQALASAAVLAGEHLKLHLNALVPAVVERLGDSKQPVRDAARRLLTTLMEVSSPTIIVE 120

Query: 415 RAGSYAWTHKSWRVREEF 468
           RAGSYAW HKSWRVREEF
Sbjct: 121 RAGSYAWMHKSWRVREEF 138


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