BLASTX nr result

ID: Dioscorea21_contig00036492 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00036492
         (591 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE53068.1| hypothetical protein OsJ_35810 [Oryza sativa Japo...    86   4e-15
gb|ABA97168.2| DNA polymerase I family protein, expressed [Oryza...    86   4e-15
gb|EEC69123.1| hypothetical protein OsI_38041 [Oryza sativa Indi...    77   3e-12
ref|XP_002442099.1| hypothetical protein SORBIDRAFT_08g011930 [S...    70   2e-10
gb|AFW56449.1| hypothetical protein ZEAMMB73_871172 [Zea mays]         67   2e-09

>gb|EEE53068.1| hypothetical protein OsJ_35810 [Oryza sativa Japonica Group]
          Length = 2044

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 58/152 (38%), Positives = 75/152 (49%), Gaps = 11/152 (7%)
 Frame = +3

Query: 96  ASKPTVSMRRCSGTPKAGLH------APGMFNTPRSVSRKSLISPGDEFWNEAFDVADGF 257
           +S+  V+++RCS TP  G        APG   TP SVS  SLISPG+EFWN A + ADG 
Sbjct: 195 SSEGFVALQRCSFTPNTGQKRVGFSTAPGAGETPMSVSTNSLISPGEEFWNAAIEFADGI 254

Query: 258 YHPLDEASCARGERENVCPM-DLSSCIAPSGGGIILRSENGVLEAQGVEGEKCGMLLNKS 434
                 A   +G     C + D SSC       I+ RS NG  + +   G      +++S
Sbjct: 255 -----SARAEKGPGRPECDVDDKSSCAVALCSKILPRSGNGGSDHENTVGSNETKQMDRS 309

Query: 435 DKSQ----AGVHSGKVSPLPVKHFDFSHEENI 518
              +    A  H    SPLPVKH DF HE+ I
Sbjct: 310 SYKEEPVAANNHHVNSSPLPVKHLDFFHEDEI 341


>gb|ABA97168.2| DNA polymerase I family protein, expressed [Oryza sativa Japonica
           Group]
          Length = 2065

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 58/152 (38%), Positives = 75/152 (49%), Gaps = 11/152 (7%)
 Frame = +3

Query: 96  ASKPTVSMRRCSGTPKAGLH------APGMFNTPRSVSRKSLISPGDEFWNEAFDVADGF 257
           +S+  V+++RCS TP  G        APG   TP SVS  SLISPG+EFWN A + ADG 
Sbjct: 195 SSEGFVALQRCSFTPNTGQKRVGFSTAPGAGETPMSVSTNSLISPGEEFWNAAIEFADGI 254

Query: 258 YHPLDEASCARGERENVCPM-DLSSCIAPSGGGIILRSENGVLEAQGVEGEKCGMLLNKS 434
                 A   +G     C + D SSC       I+ RS NG  + +   G      +++S
Sbjct: 255 -----SARAEKGPGRPECDVDDKSSCAVALCSKILPRSGNGGSDHENTVGSNETKQMDRS 309

Query: 435 DKSQ----AGVHSGKVSPLPVKHFDFSHEENI 518
              +    A  H    SPLPVKH DF HE+ I
Sbjct: 310 SYKEEPVAANNHHVNSSPLPVKHLDFFHEDEI 341


>gb|EEC69123.1| hypothetical protein OsI_38041 [Oryza sativa Indica Group]
          Length = 1986

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 50/126 (39%), Positives = 61/126 (48%), Gaps = 5/126 (3%)
 Frame = +3

Query: 156 APGMFNTPRSVSRKSLISPGDEFWNEAFDVADGFYHPLDEASCARGERENVCPM-DLSSC 332
           APG   TP SVS  SLISPG+EFWN A + ADG       A   +G     C   D SSC
Sbjct: 201 APGAGETPMSVSTNSLISPGEEFWNAAIEFADGI-----SARAEKGPGRPECDADDKSSC 255

Query: 333 IAPSGGGIILRSENGVLEAQGVEGEKCGMLLNKSDKSQ----AGVHSGKVSPLPVKHFDF 500
                  I+ RS NG  + +   G      +++S   +    A  H    SPLPVKH DF
Sbjct: 256 AVALCSKILPRSGNGGSDHENTVGSNETKQMDRSSYKEEPVAANNHHVNSSPLPVKHLDF 315

Query: 501 SHEENI 518
            HE+ I
Sbjct: 316 FHEDEI 321


>ref|XP_002442099.1| hypothetical protein SORBIDRAFT_08g011930 [Sorghum bicolor]
           gi|241942792|gb|EES15937.1| hypothetical protein
           SORBIDRAFT_08g011930 [Sorghum bicolor]
          Length = 571

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 53/141 (37%), Positives = 72/141 (51%), Gaps = 4/141 (2%)
 Frame = +3

Query: 174 TPRSVSRKSLISPGDEFWNEAFDVADGFYHPLDEASCARGERENVCPMDLSSCIAPSGGG 353
           T +SVSR SL SPG+EFWN A ++ADG     D+    RG  E     D SSC       
Sbjct: 190 TLKSVSRNSLTSPGEEFWNAAIELADGISAQADK---VRGRPEFDAAEDKSSCAVAVCSK 246

Query: 354 IILRSENGVLEAQGVEGEKCGMLLNK-SDKSQA-GVHSGKV--SPLPVKHFDFSHEENII 521
            + RSE   L+ Q   G      + K S+K ++  V+S  +  SPLPVK  DF HE++ I
Sbjct: 247 TLCRSERDELDCQNTVGSNDTHHMEKLSNKVESLAVNSQHIINSPLPVKQLDFFHEDD-I 305

Query: 522 KEKKFTLERSETLDALTSAAD 584
           K      E   + +A ++ AD
Sbjct: 306 KVSCSKFEAKGSCEACSAQAD 326


>gb|AFW56449.1| hypothetical protein ZEAMMB73_871172 [Zea mays]
          Length = 733

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 51/137 (37%), Positives = 65/137 (47%), Gaps = 6/137 (4%)
 Frame = +3

Query: 174 TPRSVSRKSLISPGDEFWNEAFDVADGFYHPLDEASCARGERENVCPMDLSSCIAPSGGG 353
           T +SVSR SL SPG+EFWN A ++ADG     D+    RG  E     D SSC   +   
Sbjct: 189 TLKSVSRNSLTSPGEEFWNAAIELADGISAQADK---VRGRPEFDAAEDKSSCAVAAFFK 245

Query: 354 IILRSENGVLEAQGVEGEK----CGMLLNKSDKSQAGVHSGKVSPLPVKHFDFSHEENI- 518
            + RS    L+ Q   G         L NK +           SPLPVK  DF HE++I 
Sbjct: 246 TLPRSGRDELDCQNTVGSNDTHHIEKLSNKVESLAVNCQHIISSPLPVKQLDFFHEDDIK 305

Query: 519 IKEKKFTLERS-ETLDA 566
           +   KF  + S ET +A
Sbjct: 306 VSGSKFETKGSYETCNA 322


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